Note: Job listings are free. To post a job listing, please
submit it to the SMB Digest.
The listings here are typically pulled from each Digest.
Please contact the webmaster for further details.
MSc/PhD/Post-Doctoral Trainees: Computational Immunology, Bar-Ilan
SMB Digest Vol 8, Issue 14 - April 8, 2008 The Computational Immunology Lab of Prof. Ramit Mehr,
Bar-Ilan University, Israel,
(http://repertoire.os.biu.ac.il/)
needs
Research Students (for the MSc or PhD degrees) and Post-Doctoral Trainees
for several fascinating projects
More info:
http://repertoire.os.biu.ac.il/Info-4-candidates.htm
If you are interested:
Please send email to mehrra@mail.biu.ac.il, stating the position you are
interested in, and attach:
* Your CV,
* Any publications or reports you have from your previous research projects,
* Your grades in your previous studies (full lists),
* A statement of your research interests, career goals and plans,
* Names of people who will be willing to recommend you . e.g., advisors
from previous studies, projects or jobs (please give names + phone
numbers and/or email addresses of these persons).
PhD Position: Mathematical Biology, University of Strathclyde
SMB Digest Vol 8, Issue 13 - March 31, 2008 We have been awarded a PhD studentship to study Mathematical Modelling of the
spread of Hepatitis C amongst Injecting Drug Users in Scotland.
Supervisors: Dr. David Greenhalgh (Department of Statistics and Modelling
Science (STAMS), University of Strathclyde, Glasgow, UK) and Dr. Sharon
Hutchinson (Health Protection Scotland (HPS)).
Project aim: The project aims to develop mathematical models for the spread
of hepatitis C virus (HCV) amongst injecting drug users (IDUs). The models
will use differential equations in the first instance. Such models have been
usefully employed to inform public health policy to control the spread of
Human Immunodeficiency Virus (HIV) amongst injecting drug users (IDUs) in the
USA and foot-and-mouth disease in the UK.
Models for the spread of HIV amongst IDUs will be adapted to HCV.
Equilibrium and stability analyses will be performed on the models and key
epidemiological parameters calculated such as the basic reproduction number
R_0. We will concentrate on designing models to examine the effect of HCV
prevention measures, such as the provision of needles/syringes and other
injecting equipment, methadone treatment and educational interventions.
Heterogeneity in injecting risk behaviours among IDUs will be explored in the
model. If time permits we would also explore individual-based stochastic
Monte-Carlo simulation models to compare the results with the deterministic
models and the effect of friendship networks and geographical dispersion on
the spread of HCV.
A very important part of this project is the link with HPS and we would use
epidemiological data on HCV from HPS to estimate the parameters in our models
as well as guidance from HPS staff (particularly Dr. Hutchinson and
Professor Goldberg) in the model formulation. We would also aim to link in
with the detailed numerical computer simulation models of the spread of HCV
used by Dr. Hutchinson and colleagues.
Stipend: This studentship is funded by EPSRC/HPS at standard EPSRC rates
(£12,923 p.a. for 2008/9), plus home fees. The preferred start date is
1st October 2008, but other start dates may be possible.
Eligibility: This studentship is suitable for UK or EU-eligible students
(fees and stipend) or other EU students (fees only) with a good or expected
good (2i or above or equivalent) Honours degree in Mathematics, Statistics or
other numerate subject (Physics, other numerate subjects considered).
International students are not eligible.
Further Information: For further information about this project and an
application form please contact Dr. David Greenhalgh, Department of
Statistics and Modelling Science, University of Strathclyde, Livingstone
Tower, 26 Richmond Street, Glasgow G1 1XH, Scotland, UK, Tel:
+44-141-552-4400 Ext 3653, Fax +44-141-552-2079,
email:-david@stams.strath.ac.uk
PhD Position: Reduction ... Models of Biochemical Networks, INRIA
SMB Digest Vol 8, Issue 13 - March 31, 2008 INRIA Grenoble-Rhône-Alpes is seeking a PhD student to work on
Methods for the reduction of large and complex models of biochemical networks
A description of the subject of the PhD project, as well as conditions for
applicants, can be found on the INRIA web site:
http://www.inrialpes.fr/jsp/fiche_actualite.jsp?CODE=1204618110974&LANGUE=1&STNAV=&RUBNAV=&RH=ACCUEIL
The application dead-line is May 15, 2008. All further information can be
obtained from
Daniel Kahn, INRIA Grenoble-Rhône-Alpes and Laboratory of Biometry and
Evolutionary Biology, CNRS/University of Lyon (Daniel.Kahn@inria.fr)
or
Hidde de Jong, INRIA Grenoble-Rhône-Alpes (Hidde.de-Jong@inria.fr)
PhD Position: Evolutionary Dynamics, Simula Research Laboratory
SMB Digest Vol 8, Issue 13 - March 31, 2008 Simula Research Laboratory conducts basic research in the fields of
communication technology, software engineering and scientific computing. The
research in the Scientific Computing (SC) department is focused on the
development of numerical methods, algorithms and software, and large scale
biomedical and systems biology oriented simulation studies applying these
methods. In recent years, the main application area for computational
research studies has been the simulation of the electrical and mechanical
activity of the heart. Currently, we plan to extend our computational
research to simulations of the evolutionary dynamics of genetic networks
controlling the properties of organisms.
The aim of the research project is to study key evolutionary processes such
as the adaptation of organisms to their environment, the splitting up of a
species into multiple species and the development of multicellular organisms
from a single fertilized cells. A key aspect of the research will be to study
how the architecture and dynamics of genome organization and gene regulatory
network structure influence the properties of organisms and hence how they
influence the above mentioned evolutionary processes and how this contrasts
with findings from more classical population genetics models.
Our understanding of genome organization and gene regulatory networks has
changed dramatically over the last decade. A large part of DNA that was
previously considered junk turns out the be functional after all, coding for
RNAs that are however not translated into proteins. These RNAs in turn are
often involved in regulating the expression of genes, which were previously
thought to be exclusively regulated by proteins. Incorporating these new
insights into our models is another key aspect of the research project.
Modeling formalisms used will typically be discrete, individual- based,
event-based, and often spatially extended and will involve the explicit
modeling of the evolution of genes, genomes and gene regulatory networks
determining the properties of simulated agents. The project will be
supervised by a new member of our research group, Dr. Kirsten ten Tusscher
(http:// www-binf.bio.uu.nl/khwjtuss/).
Simula offers excellent opportunities for doing high quality research,
generous support for travels and equipment, and competitive salary (around
47.000,- Euro/69.000,- USD for a Ph.D. position)
We are looking for candidates who fulfill one or more of the following
requirements:
a strong interest in evolutionary biological research
a University degree in computational biology, systems biology, biomedical
engineering, artificial life, artificial intelligence, computer science,
physics or applied mathematics experience with computational modeling,
simulation and analysis of complex (biological) systems.
The position requires excellent English writing skills and high marks from
the BSc and MSc degree. Women are encouraged to apply. For more information
contact Joakim Sundnes (sundnes@simula.no) or Kirsten ten
Tusscher(tentussc@simula.no). To apply, email a short application letter,
curriculum vitae, copies of transcripts and grades, and a publication list to
jobs@simula.no. The subject of the email must contain 0830 Scientific
Computing.
Application deadline: May 16, 2008
PhD Programmes: IGC, Lisbon
SMB Digest Vol 8, Issue 12 - March 20, 2008 Applications are now open for the 2008 academic year PhD programmes at
the Instituto Gulbenkian de Ciencia, in Lisbon, Portugal.
The IGC is once again hosting 3 international PhD programmes:
Gulbenkian/Champalimaud PhD Programme in Neuroscience
http://pd2008.igc.gulbenkian.pt/pgcn/
PhD Programme in Computational Biology
http://pd2008.igc.gulbenkian.pt/pdbc/
IGC International PhD Programme in Multidisciplinary Life Sciences
http://pd2008.igc.gulbenkian.pt/pgd/
Information on the programmes and application procedures are available at
www.igc.gulbenkian.pt.
The deadline for applications is 4 April 2008.
Fully-funded PhD Studentships: University of Leicester, UK
SMB Digest Vol 8, Issue 12 - March 20, 2008 Up to four fully-funded PhD studentships are available in the Department of
Mathematics of the University of Leicester, UK. Although the range of the
research topics across the department is rather broad, for at least one of
the positions a preference may be given for a research related to
mathematical biology. Applications are welcome as soon as possible, ideally by
April 15th, but later applications may also be considered.
For more details about the positions, please visit
http://www.jobs.ac.uk/jobs/DF062/EPSRC_PhD_Studentships/
Informal requests can also be sent to Dr. Sergei Petrovskii at
sp237@le.ac.uk
PhD Student: Cell-based Modeling Plant Development, VIB, Ghent
SMB Digest Vol 8, Issue 12 - March 20, 2008
The research group Plant Systems Modeling of the Department Plant Systems
Biology at the VIB in Ghent, Belgium, has an opening for a
Ph. D student (f/m)
Computational modeling of phytohormone cross-talk during lateral root
initiation
The VIB Department Plant Systems Biology in Ghent, Belgium has an opening for
an ambitious and energetic research assistant in the research group Plant
Systems Modeling, which focuses on computational modeling of plant
development. Computer modeling is a crucial pillar in systems biology, a
relatively new approach in biology that shifts focus from individual
molecules, genes and cells to their dynamic interplay: how do molecules,
genes and cells form a working mechanism, behaving in a predictable way?
Modeling the biological system in a computer simulation gives us insights
into developmental mechanisms that suggest new experiments, which our
experimental collaborators test in the wet-lab.
What will be your task?
You will be building and analyzing dynamical models of auxin transport and
its cross-talk with other phytohormones including cytokynin, during lateral
root initiation. The work will be carried out in close collaboration with the
institute's experimental labs of Dr. Tom Beeckman, Dr. Eva Benková, and
Prof. Dr. Jirí Friml. Lateral roots originate from cells in the root basal
meristem, a proliferating tissue region just above the root tip, forming a
regular branching pattern with evenly spaced lateral roots. The crucial
signal for initiating the lateral root is most likely the phytohormone auxin.
Auxin levels oscillate at a period of around 15 hours, precisely coinciding
with the rhythm by which new lateral roots appear.
Our modeling project aims at unraveling the mechanisms behind these
oscillating auxin flows, which may be driven by a dynamic interaction between
auxin, the production and cellular localization of its transporter proteins,
and additional phytohormones that modulate the transporter proteins'
localization. In the second part of your project you will also include root
growth and the tightly orchestrated cell divisions following lateral root
initiation.
Your background
For this challenging Ph.D dissertation project we are looking for an MSc
in mathematical or theoretical biology, or an MSc in physics, applied
mathematics or computer science with interest and affinity for biology.
Programming experience (C++) and experience in biological modeling are a
big plus.
What do we offer you?
This project gives the opportunity to get a PhD in systems biology, in
an energetic, international, multi-disciplinary centre of excellence for
plant systems biology. We have funding for four years, but we encourage
you to apply for external funds.
Interested?
Have a look at our website, www.psb.ugent.be, and send your cv and
motivated letter of application to:
Dr. Roeland Merks / Plant Systems Modeling group
Department Plant Systems Biology, VIB
and Molecular Genetics, Ghent University
Technologiepark 927, 9052 Gent, Belgium
Tel: +32 09 33 13823, email: roeland.merks@psb.ugent.be
PhD Studentships: Infectious Disease Modelling
SMB Digest Vol 8, Issue 10 - March 10, 2008
Modelling and Economics Unit, Health Protection Agency Centre for Infections.
Applications are invited for three PhD studentships in infectious disease
modelling, tenable from September 2008. The studentships will be based
jointly between the Modelling and Economics Unit, in the Health Protection
Agency (HPA) Centre for Infections in North London and the London School of
Hygiene & Tropical Medicine or the University of Strathclyde. As such the
successful candidate will benefit from exposure to a stimulating and dynamic
modelling group, access to rich national datasets and relevant post-graduate
courses.
The following research projects are available:
Modelling the transmission of HIV in men who have sex with men in the UK
http://www.lshtm.ac.uk/prospectus/howto/HPA_studentships.html
Using mathematical modelling to estimate the extent of ongoing M tuberculosis
transmission in the UK
http://www.lshtm.ac.uk/prospectus/howto/HPA_studentships.html
Developing serotype-specific models of the transmission of pneumococcal
carriage and the effect of pneumococcal conjugate vaccines on disease in the
UK
http://www.stams.strath.ac.uk/vacancies/student/Pneumo_PhD_project_description.pdf
Applicants should possess a bachelors (2i or above) and (preferably) a
masters degree in mathematics, science or other discipline with a strong
analytical component, which is relevant to mathematical modelling of
infectious diseases. Experience of computer programming is desirable. The
studentship will cover EU tuition fees, together with a stipend of £15,080
(MRC rate) for three years.
The application procedure depends on the studentship - follow the links for
the corresponding studentship for further details. Any enquiries should be
sent to: Ms Saila Shah (email: saila.shah@hpa.org.uk)
The closing date for applications is 4th April 2008, with interviews during
the week beginning 14th April, or as soon as possible thereafter.
Positions: Computational Neuroscience, CNCR, Amsterdam
SMB Digest Vol 8, Issue 10 - March 10, 2008
Applications are invited for two research positions in the Neuroinformatics
Group of the Center for Neurogenomics and Cognitive Research (CNCR), VU
University Amsterdam. The positions are funded by a EU-FP7 grant for the
Collaborative Large-scale Integrating Project Self-Constructing Computing
Systems (SECO). Using a combined computational and experimental approach, the
SECO project investigates the principles by which populations of real or
artificial neurons can grow and assemble themselves into functioning
circuits.
The first 4-year project, for a postdoctoral researcher, is on the
development of dendritic and axonal growth models. The aim is to create
models for neuronal morphogenesis in which cells develop through growth cone
migration and branching, and formation of synaptic connections in interaction
with their environment. A major challenge is to find a balanced level of
description of neuronal outgrowth based on local mechanisms and interactions
in space and time that will be suitable for an algorithmic implementation.
The models will be used to study the development of cortical and thalamic
circuitry. The ideal candidate should combine a strong neurobiological
interest and knowledge with a solid background in neuro-biophysics and
extensive experience in computational modeling and computer programming.
The second 4 (or 3)-year project, for a PhD student (or postdoctoral
researcher), focuses on the reciprocal interactions between neuronal network
structure and activity dynamics in developing neural circuits. Using
computational models, we will explore the impact of activity-dependent
plasticity rules on the evolution of developing neuronal networks under their
own (spontaneous) firing activity. The research will be guided by the
hypothesis that networks will evolve towards self-consistent states, in which
firing patterns stabilizes the synaptic connectivity structure that also
gives rise to these firing patterns. The ideal candidate should combine a
strong neurobiological interest and knowledge with an excellent background in
computational neuroscience and neuronal network research.
Candidates of both projects will contribute significantly to the
collaborative effort of the SECO consortium.
For further information about these positions, please contact Dr. Arjen van
Ooyen, arjen.van.ooyen@cncr.vu.nl, or Dr. Jaap van Pelt,
jaap.van.pelt@cncr.vu.nl. Application letters including a CV, research
experience, a short statement of research interests, and contact details of
two referees should be sent by email to Dr. Arjen van Ooyen before the 1st of
April 2008.
PhD Studentship: Plant Systems Biology, Imperial College London
SMB Digest Vol 8, Issue 9 - March 3, 2008
A PhD position in systems biology of plants is available at Imperial College,
London from 1st October 2008. The position is funded by a joint Microsoft
Research/BBSRC Dorothy Hodgkin Postgraduate Award, and will be jointly
supervised by Dr Radhika Desikan (Biology) and Professor Jaroslav Stark
(Mathematics/CISBIC). The award, for a total amount of £90,000 will cover
tuition fees and living expenses.
The project aims to build a mathematical model of the integrated signalling
networks in plant cells called stomatal guard cells. These cells regulate
water and gas exchange between the plant and the environment. Modelling of
the signal integration processes is essential in order to understand better
how plants may be able to survive adverse conditions, such as those caused by
global warming. The project will develop a dynamical model to fit the
existing data. The model will in turn inform the choice of further
biological experiments, and their outcome will enable more complex
modelling. Deterministic methods from linear and non-linear differential
equations will be employed (such as bifurcation analysis) as well as
stochastic differential equations.
A student with mathematics/computer science/computational biology background
(with grades equivalent to a UK first class honours degree) of a nationality
from those countries eligible for the DHPA (see www.rcuk.ac.uk/hodgkin/ )
will be eligible. The student will interact with both biologists (in RD's
lab) and mathematical modellers (in JS group/CISBIC) in order to further this
project.
For further details contact Dr Radhika Desikan (r.desikan@ic.ac.uk) or
Professor Jaroslav Stark (j.stark@ic.ac.uk). Closing date for applications is
30th April 2008. A PDF of this advertisement can be found at
http://www.ma.ic.ac.uk/~jstark/PDF/MSR%20Plant%20PhD.pdf
Graduate Positions: Theoretical Biology, Royal Holloway, U London
SMB Digest Vol 8, Issue 9 - March 3, 2008
The following 2 PhD studentships in theoretical biology are currently
advertised in my group:
Project 1: The evolution of pseudogamy and the emergence of diversity and
altruism.
Project 2: Lymphocyte homeostasis in man; measurement and modelling of thymic
versus peripheral generation of nave lymphocytes in the maintenance of normal
T-cell pools.
Description project 1:
The evolution of pseudogamy and the emergence of diversity and altruism.
Main supervisor: Prof. Vincent Jansen, co-supervisor: Dr Ian Barnes
This PhD Studentship aims to investigate how diversity of and altruism emerge
using mathematical modelling and simulation studies. The research will be
inspired by the evolution of pseudogamy. Pseudogamy is a form of reproduction
where the males do not contribute genetic material to the next generation,
despite the fact that the females can only reproduce if they have mated.
This studentship is suitable for candidates with a degree(UK 2.1 degree or
higher or equivalent thereof) in biology and proven skills in mathematical
modelling/computer programming or for applicants with a degree in a
quantitative subject (e.g. physics, mathematical or computer science) and an
affinity for biology. The studentship will cover fees at UK-EU level and a
maintenance stipend of approximately 14,000 per annum for 3 years. We will
not consider candidates from outside the EU unless the candidate has
additional funding available. The selected candidate will start in or close
to October 2008 will work in the research groups of J
If you require further information on this studentship, see or
http://www.rhul.ac.uk/Biological-Sciences/Vacancies/2008_Jansen.doc contact
Vincent.jansen@rhul.ac.uk. The deadline for applications is 19 March 2008.
The interviews are planned for the week of 21 April 2008. To apply, use the
form on
http://www.rhul.ac.uk/Biological-Sciences/Vacancies/2008_PhDapplicationForm.pdf
or generate your own form using
http://www.rhul.ac.uk/Registry/Admissions/applyonline.html. Please send the
completed form, together with a recent CV, to Prof. Vincent Jansen, School of
Biological Sciences, Royal Holloway, University of London, Egham, Surrey TW20
0EX by post or e-mail. If you use the online application, please make sure
you send a copy of the application form by email to
Vincent.jansen@rhul.ac.uk.
Description project 2:
Joint PhD Studentship with Royal Holloway - St Georges University of London
Lymphocyte homeostasis in man; measurement and modelling of thymic versus
peripheral generation of nave lymphocytes in the maintenance of normal T-cell
pools.
Lead Supervisor: Derek Macallan, Professor in Infectious Diseases and
Medicine, Centre for Infection, St George's, University of London.
Co-supervisor: Vincent Jansen, Professor of Mathematical Biology, School of
Biological Sciences, Royal Holloway, University of London.
Project Description
Lymphocyte populations persist because dying cells are continually replaced,
unless replacement fails, as in HIV infection, with devastating consequences.
Within this context, some clonal populations must be retained long-term in
order to confer "immunological memory". How this is achieved is poorly
understood. This project seeks to extend our understanding of human
lymphocyte physiology by combining in vivo measurements of lymphocyte
kinetics in human studies in Dr Macallan's laboratory at St George's with
theoretical modelling and in silico experiments in Dr Jansen's group at RHUL.
We will specifically study the role of nave cells (defined by surface markers
such as CD31) in regenerating peripheral nave populations and investigate the
effect of ageing on this process. We will compare in vivo nave T-cell
labelling data with data on rates of recent thymic emigration from the
abundance of T-cell receptor rearrangement DNA excision circles (TREC). This
combined approach will provide important new insights by r
How to apply For further enquiries, see
http://www.rhul.ac.uk/Biological-Sciences/Vacancies/2008_SWAN_Macallan&Jansen.doc
contact Derek Macallan (macallan "at" sgul.ac.uk) or Vincent Jansen
(Vincent.jansen "at" rhul.ac.uk). This project will provide fees at UK-EU
level and a maintenance stipend. We are seeking candidates with a degree (UK
2.1 degree or higher (or equivalent)) in biology or biomedical sciences with
either relevant laboratory skills of relevant
mathematical/statistical/computer science skills. To apply please send a CV,
an application form
http://www.swlacademicnetwork.ac.uk/documents/PhDSWanApplicationform08.doc
(which can be downloaded from
http://www.swlacademicnetwork.ac.uk/PhDStudentships.html), plus two letters
of reference, as well as the title and supervisors name to
enquiries@swlacademicnetwork.ac.uk by 7th April 2008.
PhD Fellowships & Postdoctoral Positions: CoSBi, Italy
SMB Digest Vol 8, Issue 8 - February 25, 2008
PhD fellowships and Postdoctoral positions are available at the Microsoft
Research - University of Trento Centre for Computational and Systems Biology
(http://www.cosbi.eu/) in Trento, Italy to conduct research in the following
areas:
- Modeling cell cycle regulation of yeast and mammalian cells; Modeling
polarized cell growth; Cancer tissue modeling.
Details at: http://www.cosbi.eu/Rpty_Activ_Dynmol.php
Informal enquiries: Attila Csikasz-Nagy (csikasz at cosbi dot eu)
- Evolution and dynamics of chemotaxis; Dynamics and structure of signaling
pathways; Robustness against gene deletion.
Details at: http://www.cosbi.eu/Rpty_Activ_Pathway.php
To fill the advertised positions, we are looking for enthusiastic scientists,
trained in biology, mathematics, physics, computer science, or closely
related areas.
Formal applications and general inquiries should be made through the web site
of the Centre: http://www.cosbi.eu/Careers_Home.php
Graduate Position: Math or EES, University of Maine
SMB Digest Vol 8, Issue 7 - February 18, 2008
The University of Maine in Orono currently has a two-year graduate
assistantship position available for qualified applicants seeking graduate
training leading to a master's degree (either an M.A. in Mathematics, or an
M.S. in Ecology and Environmental Science), beginning in Fall 2008.
The relevant area of research for the position is spatial population modeling
in spatiotemporally structured heterogeneous environments. This includes
mathematical and computational models of populations in dynamic heterogeneous
habitats. Collaboration with faculty in the School of Biology and Ecology
would also be a likely part of the position, as the models will be applied to
the spread of agricultural crop pests and invasive species, such as maggot
flies in commercial blueberry fields and invading Asian woodwasps.
The position is part of the Spatial Population Ecological and Epidemiological
Dynamics Lab group (SPEED Lab) of Dr. David Hiebeler
(http://www.math.umaine.edu/faculty/hiebeler/speedlab.html).
Potential applicants are strongly encouraged to contact Dr. Hiebeler prior to
their application.
Application materials should be submitted through the University's Graduate
School (see http://www2.umaine.edu/graduate/article.php?id=63), and should
indicate in the application that they wish to be considered for Dr.
Hiebeler's SPEED Lab position.
Applicants will be considered until the position is filled. This position is
restricted to U.S. citizens and permanent residents.
The University of Maine is an Equal Opportunity/Affirmative Action Employer.
PhD-student Positions: Biomedical Data Processing, Leuven
SMB Digest Vol 8, Issue 7 - February 18, 2008
PhD-student Positions in Biomedical Data Processing at Katholieke
Universiteit Leuven, Belgium
Location: Department of Electrical Engineering, Division ESAT-SCD,
research group BioMed, Katholieke Universiteit Leuven, Leuven, Belgium
(http://www.esat.kuleuven.be/sista/members/biomed/)
Research group.
The BIOMED team within the ESAT-SCD division consists of 2 staff members, 3
postdocs, 17 PhD students. Research ^ fundamental/theoretical as well as
application oriented -- is performed in the domain of (multi)linear algebra,
(non)linear signal analysis, classification and system identification with
special focus to the development of numerically reliable and robust
algorithms for the extraction of clinically, biochemically or
pharmaceutically relevant information (e.g. metabolite concentrations in the
brain) out of low-quality multi-channel measurements in order to enable an
improved medical diagnosis. In this domain the group has built up an
international reputation. Applications under study are: quantification of
metabolite concentrations using in-vivo Magnetic Resonance Spectroscopic
(MRS) data and images, quantification of brain oxygenation and autoregulation
in neonates using (functional) Near-Infrared Spectroscopy, quantification of
cardiovascular dynamics and heart-rate variability analysis, event-related
potential analysis using EEG, stress monitoring using EMG, detection and
localization of epileptic seizures based on scalp-EEG monitoring, and
preoperative classification and prognosis of (brain, ovarian, prostate)
tumours.
Three PhD positions.
We seek one of more outstanding graduate students for the following
multidisciplinary research projects:
1. EEG signal processing for non-invasive Brain-Computer interaction,
possibly combined with multimodal registration of other relevant information
(EMG/ECG/) and signal interpretation for motor recovery;
2. Descriptive and predictive models and advanced Statistical analysis for
computer-aided diagnosis and prognosis of cancer and autism;
3. Integration of EEG and functional MR Imaging with applications in
monitoring cognitive disorders in patients with MS and ADHD.
The research is done in a multidisciplinary environment in strong
collaboration with the appropriate divisions in the University Hospitals
K.U.Leuven. All positions are immediately vacant. The PhD work will be
supervised by Prof. Sabine Van Huffel.
Profile: We are particularly seeking candidates with a Master-of-Science
degree in biomedical, electrical, computer science or mathematical
engineering, in bioengineering or in mathematics, and with strong interests
in optimization, signal processing, statistics, numerical computations, and
biomedical applications. The ability to become acquainted with new methods
within short time and good familiarity with scientific tools like MATLAB
programming and statistical analysis are appreciated. The chosen candidate
will be an enthusiastic person and initiator with good communication skills
and a good knowledge of English.
Application: To apply, please send a CV and a cover letter before April 15,
2008 to Prof. Sabine Van Huffel (sabine.vanhuffel@esat.kuleuven.be)
Information: The salary will be assigned according to the Belgian university
salary system. The PhD-student appointment is for the duration of four
years.
MSc and PhD Studentships: Biomathematics, University of Guelph
SMB Digest Vol 8, Issue 5 - February 4, 2008 Applications are being accepted for MSc and PhD studentships in epidemic
modelling and ecological modelling at the University of Guelph. Candidates
should have background in mathematics or other quantitative fields, such as
physics or computer science. Programming ability is desirable, as is previous
coursework in biomathematical modelling. Guelph is a pleasant town of
100,000, situated only 1 hour from Toronto and its numerous universities and
research hospitals. Interested candidates should send a letter of interest
and a CV to:
Professor Chris Bauch,
Department of Mathematics and Statistics,
University of Guelph,
Email: cbauch@uoguelph.ca,
Website: http://www.uoguelph.ca/~cbauch
BBSRC Studentship: Maths & Biology Skills, Reading University
SMB Digest Vol 8, Issue 5 - February 4, 2008 Prof Richard Sibly of Reading University is seeking applicants for a BBSRC
studentship that needs both mathematical and biological skills. Some
information about the studentship can be found at
http://www.findaphd.com/search/showproject.asp?projectid=15723&inst=READ-ESRT&searchtype=i&theorder=2&page=1
In practice the direction of the studentship will be open to the student's
ideas, interests and suggestions.
The deadline for applications is 15 February 2007. What is needed is a CV, a
covering letter and contact details for two academic referees. The CV only
need give details of education and gap year/holiday jobs if relevant. The
covering letter should say why you are interested in the project and give
details of what you are doing in your honours research job, and say what you
want to do eventually. Here you need to say you want to be a research
scientist or academic, so that the studenship is seen to provide training for
your future career. It can be up to a page of A4, single line spaced. The
referees should say you are likely to get a 2i or a first
Any problems get in touch - I'm very happy to help.
PhD Studentship: Mathematical Modelling, University of Glasgow
SMB Digest Vol 8, Issue 5 - February 4, 2008 PhD studentship to start in summer or autumn 2008:
Mathematical modelling of ontogenic colour change in relation to predation
pressure
Supervisor: Prof. Graeme D Ruxton, University of Glasgow
Funded by NERC (please check
http://www.nerc.ac.uk/funding/available/postgrad/eligibility.asp
for eligibility criteria)
Many larval insects show dramatic ontogenic change in colouration: changing
from a camouflaged appearance early in life (such as the early instar
caterpillar on the left that is considered to mimic a bird dropping) to
highly visible warning colouration later in life (see the photo on the right
of a later instar of the same species). More generally, ontogenic change in
coloration is widely reported across diverse taxa (e.g. fish, snakes,
crustaceans as well as insects) and is often considered to be driven by
changing predation pressure as the individual grows. There is currently no
theoretical framework within which to interpret instances of ontogenic colour
change (OCC). This studentship would aim to provide such a framework.
Specifically, it would use stochastic dynamic state-dependent modelling
techniques to provide a model that predicts under what ecological
circumstances OCC would be expected, when during ontogeny such change is
expected to occur, what the associated physiological or behaviour changes
expected to occur with the OCC are and what the mechanisms underlying such
changes are. This studentship will run in parallel with a programme of
experimental work that will be useful in parameterising and testing the
models produced.
This project would suit either a student with a highly numerate background
(e.g. applied maths, physics or computing science) interested in applying
their skills to biology.
Further details available on request from G.Ruxton@bio.gla.ac.uk
Postdoc and PhD Positions: Mathematical Biology, Helsinki
SMB Digest Vol 8, Issue 5 - February 4, 2008 The Mathematical Biology Group at the Department of Biological and
Environmental Sciences, University of Helsinki, Finland (leader Dr. Otso
Ovaskainen) is seeking outstanding, highly motivated candidates to join
research projects at the interface between mathematics and ecology and
evolutionary biology. Successful candidates may have their training either in
mathematics or in biology, the main criteria being the potential to perform
top-quality research. We anticipate hiring up to 4 postdoctoral researchers
or Ph.D. students over the next 3 years. Research projects will be developed
in conjunction with the interests of the successful candidates, focused on
the following areas:
1. The roles of space and stochasticity in population dynamics
2. Metacommunity dynamics of wood-decaying fungi
3. Animal movement in heterogeneous environments
4. Bayesian approaches in evolutionary quantitative genetics
The PhD student positions are available for 4 years. The postdoc positions
are for 1 year, with the possibility of a 2-year extension.
The Mathematical Biology group is part of the Metapopulation Research Group
(leader Prof. Ilkka Hanski), which is a Centre of Excellence in Research
supported by the Academy of Finland. We offer an international research
environment with excellent possibilities to cooperate with experts in
mathematics, statistics, population biology, and evolutionary ecology. Salary
and social benefits according to the University of Helsinki Salary system,
around 2,300 Euro/month for PhD students and 3,100 Euro/month for post docs
(the latter negotiable).
Applications including a short CV (max 3 pages), list of publications, and
the e-mail addresses of two researchers willing to write a letter of
reference should be sent to otso.ovaskainen@helsinki.fi with cc to
tuuli.ojala@helsinki.fi; write either "postdoc position" or " PhD student
position" on the subject line. For more details on the research projects and
on the application procedure, see
http://www.helsinki.fi/science/metapop/MBG/positions/index.htm
Deadline for applications 14th March 2008, starting date 1st May 2008
(negotiable).
PhD Studentships (4): Systems Biology, University of Nottingham
SMB Digest Vol 8, Issue 3 - January 22, 2008 Four PhD studentships are available to mathematically trained applicants as
part of a major programme in Systems Biology at the University of Nottingham.
Each provides the opportunity to work on a multidisciplinary project
developing mathematical models for an important area of biology, namely:
(i) Modelling the effect of maternal diet on the development of diseases
(such as diabetes and obesity) in adult life (informal enquiries to Professor
Helen Byrne, helen.byrne@nottingham.ac.uk).
(ii) Predictive modelling of the earliest events in vertebrate embryo
development (informal enquiries to Professor John King,
john.king@nottingham.ac.uk).
(iii) Integrative modelling of angiogenesis and progesterone production in
the ovary (informal enquiries to Dr Markus Owen,
markus.owen@nottingham.ac.uk).
(iv) From model to crop: modelling root development in cereals (informal
enquiries to Professor John King, john.king@nottingham.ac.uk).
Each project will be co-supervised by a mathematician and experimentalist and
the successful applicants will be members of an extensive team working on a
wide range of topics at the interface between mathematics and biology.
Applicants should have a strong degree in mathematics or a related subject
and a commitment to multidisciplinary research.
The studentships are available from 1 October 2008 for a period of 4 years.
Further information about the School of Mathematical Sciences is available at
http://www.maths.nottingham.ac.uk/.
Applications can be made on-line at: http://pgapps.nottingham.ac.uk/.
Alternatively, application forms are available from the Postgraduate
Admissions Secretary, School of Mathematical Sciences, The University of
Nottingham, University Park, Nottingham, NG7 2RD. Tel: +44 (0)115 9514948.
Fax: +44 (0)115 9514951. Email: pgmath@maths.nottingham.ac.uk. Students
should state clearly that they wish to be considered for these studentships
in the Personal Statement section of their application.
Closing date: 1 March 2008
PhD Position: Simulating Evolutionary Dynamics, Simula Research Lab
SMB Digest Vol 8, Issue 1 - January 9, 2008 Simula Research Laboratory conducts basic research in the fields of
communication technology, software engineering and scientific computing. The
research in the Scientific Computing (SC) department is focused on the
development of numerical methods, algorithms and software, and large-scale
biomedical and systems biology oriented simulation studies applying these
methods.
Currently, we plan to extend our biologically inspired research to simulation
studies of evolutionary dynamics of genetic networks and their role in
species adaptation, formation and development. For this project we seek a
candidate for an available PhD position (3 years). The position will be
supervised by a new member of our research group; Dr Kirsten ten Tusscher. In
the current, post-genomic era, it has become increasingly clear that to
understand the functioning of biological cells, tissues, organisms and
populations it is not enough to know which genes or proteins they possess. In
addition, one also needs to understand how these genes and proteins interact
dynamically in complex networks and how these interactions have arisen during
evolution. As an illustration, after the human genome was sequenced, people
were surprised by the relatively small number of genes found in humans. Based
on gene numbers in simpler organisms a much larger number was expected. It is
now becoming clear that our larger complexity relative to single celled and
simple multicellular organisms resides not so much in the number of genes we
have but in the way these genes interact in complex networks. In the current
research we will study the role of genetic networks in several key biological
evolutionary processes: the adaptation of species to their (changing)
environment, the splitting of a species into multiple species, and the
development of multicellular organisms.
Simula offers excellent opportunities for doing high quality research,
generous support for travels and equipment, and competitive salary (around
47.000,- Euro/69.000,- USD for a Ph.D. position and 58.000,- Euro/84.500,-
USD for a Postdoc position).
We are looking for candidates with a strong interest in biological and
evolutionary oriented research and a University degree in physics, applied
mathematics, computer science, artificial intelligence, biomedical
engineering, or computational biology. The position requires excellent
English writing skills and high marks from the BSc and MSc degree. Women are
encouraged to apply. For more information visit http://www.simula.no/jobs, or
contact Kirsten ten Tusscher (tentussc@simula.no) or Joakim Sundnes
(sundnes@simula.no). To apply for these positions, email a short application
letter and curriculum vitae with publication list to jobs@simula.no. The
subject of the email must contain 0820 Scientific Computing.
Application deadline: February 15, 2008
Postdoctoral Position: Mathematical Biology, UBC
SMB Digest Vol 8, Issue 14 - April 8, 2008 Postdoctoral position for 2008-09
http://www.math.ubc.ca/~keshet/MathBioAd.html
Modelling actin-based cell motility and its biochemical regulation
Vancouver, British Columbia
A PDF position has reopened in the Mathematical Biology group at UBC.
We are still seeking an excellent candidate for this job.
Job description
(1) Modelling the cytoskeleton, cell motility, and signal transduction: The
research focuses on the regulation of the actin cytoskeleton and implications
for cell polarity and motility.
Incoming post-doctoral fellows are sought from either experimental cell
biology background (with strong interest in quantitative methods and
modelling) or mathematical/biophysics background. Applications are also
welcomed from candidates with strong computational skills (e.g. finite
element, immersed boundary) wishing to enter this area.
Setting
The Math-Biology group at UBC presents many opportunities to work on a variety
of exciting research (including, but not limited to theoretical immunology,
neurophysiology, epidemiology, ecology and evolution) and to collaborate with
other researchers. PDFs are encouraged to explore a variety of interests within
this setting.
In future, teaching in the Dept of Mathematics could be arranged, subject to
interest and approval by the Department.
Preference will be given to candidates with track record in quantitative
research with good communication skills, and with ability to work well both
independently and in a team.
Please send the following material: (1) CV including a list of publications,
preprints, reprints (2) statement of research interests (3) names, addresses,
email addresses, of three people who could provide letters of reference on
your behalf
L. Edelstein-Keshet, Dept of Mathematics, UBC, keshet@math.ubc.ca
Research Fellowship: Mathematical / Computational Ecology, Belfast
SMB Digest Vol 8, Issue 14 - April 8, 2008 Beaufort Marine Research Fellowship.
Applications are invited for this prestigious 7-year Fellowship in
mathematical / computational ecology in support of the Ecosystem Approach to
Fisheries Management. Based in Belfast, the position will be instrumental in
building and evaluating multi-species size-spectrum models of specific sea
areas. Much of the planned work will be highly innovative and often
mathematically or computationally challenging. The Research Fellow will work
closely with colleagues and research students in the Danish (see
http://www.dfu.dtu.dk/English/Commercial_fisheries/Marine_ecosystems.aspx)
and Irish (see
http://www.marine.ie/home/services/operational/fishstock/Ecosystems.htm)
Marine
Institutes (some time may be spent in those countries). The project is
led by Dr Keith Farnsworth (see
http://www.qub.ac.uk/schools/SchoolofBiologicalSciences/Staff/DrKDFarnsworth/)
at Queen's University Belfast.
We are looking for someone with at least 3 years recent relevant research
experience and competence with systems of PDEs and stochastic differential
equations; expertise in at least one of: Mathematica, Matlab, or R (or one
of its relatives) and experience with Unix. Experience of grid or parallel
computing will be an advantage as well. Further information can be obtained
from the School of Biological Sciences, Queen's University Belfast
(sobb.office@qub.ac.uk). For application and further particulars
see http://www.qub.ac.uk/sites/QUBJobVacancies/ResearchJobs/ .
Salary Scale: £27,466 - £35837 (including contribution points)
Closing Date: 4.00 pm on Friday 25th April 2008. It is anticipated that
interviews for the position will be held on 15th May 2008.
Beaufort Marine Research Awards grant-aided by the Irish Government under
the National Development Plan 2007-2013 (NDP).
Post Doctoral Associate in Mathematical Biology
Applications are invited for a postdoctoral fellowship in
mathematical biology at the University of Miami. The position, funded
in part by a grant from the Howard Hughes Medical Institute, is set to
begin in the Fall of 2008 and is for two years. The primary
responsibility of the fellow in the fall of each year will be to
develop an upper level undergraduate course in mathematical biology
suitable for a combined audience of mathematics and biology students
that the fellow will teach in the spring semester. The fellow is also
expected to conduct research at the interface of mathematics and
biology in conjunction with University of Miami faculty. Position
#036663. Currently the University of Miami has faculty with research
interests in ecology, population dynamics, epidemiology, and
bioeconomics. In addition, the University is also home to the Abess
Center for Ecosystem Science and Policy and to the newly established
Institute for Theoretical and Mathematical Ecology. Applicants should
have received a Ph.D. in the mathematical sciences and should have
demonstrated interest in research at the interface of mathematics and
biology. We offer a competitive salary plus benefits. Review of
applications will commence May 1, 2008 and will continue until the
position has been filled. Please send a letter of application,
professional resume, teaching philosophy and contact information for 3
references to: Professor Stephen Cantrell Chairman of Hiring Committee
P.O. Box 249085 Coral Gables, Florida 33124-4250.
Postdoctoral Position: Computational Physiology, U Kentucky
SMB Digest Vol 8, Issue 13 - March 31, 2008 A postdoctoral position in computational physiology is available in the
Center for Biomedical Engineering at the University of Kentucky. This
NIH-funded research project involves: (i) development of signal processing
methods to detect arousals and other transient events in EEG signals, and;
(ii) mathematical modeling of oxygen delivery to the brain in healthy elderly
subjects and in patients with sleep-disordered breathing. Candidates should
have training in stochastic signal processing (e. g., spectral analysis,
entropy, time-frequency analysis) and experience using simulation software
for solving time-dependent differential equations. Basic knowledge of
respiratory physiology and neurophysiology is necessary. The ideal candidate
will be enthusiastic about participating in both aspects of the project.
Additional information about the laboratory may be found at
http://www.uky.edu/~ebruce/.
Applications may be sent by email to ebruce@uky.edu. Candidates should
submit the following (PDF attachments preferred): (1) current C. V.; (2)
contact information for 3 references.
Eugene N. Bruce, Ph. D.
Professor, Center for Biomedical Engineering
University of Kentucky, Lexington, KY 40506-0070
Postdoc: Ecological Epidemiology, University of Gothenburg
SMB Digest Vol 8, Issue 12 - March 20, 2008 Post-doc position in epidemiology; dynamics of infectious disease in
metapopulations, Ref.nr E36 1191/08
at Department of Marine Ecology, University of Gothenburg.
(Deadline for applications 15 April 2008.)
A post-doc position, funded by the Swedish Research Council, on the
epidemiology of infectious wildlife diseases is available. The job includes
literature surveys, data analysis, and the development of theoretical
models.
The aim of the program is to develop new empirically based mathematical
models that incorporate explicitly several aspects of animal population
ecology that are often ignored. Central questions include how spatial
structure and seasonal behaviour influence disease dynamics. A comparative
approach will be used with diseases particularly in focus being seal plague
(Phocine distemper virus) in harbour seal and the bubonic plague in rodents.
The candidate should have a biological, mathematical or medical degree with
experience in a relevant sub-discipline (for example, mathematical
epidemiology, zoonotic disease ecology or the population biology of wildlife
disease). It is also important that the candidate has experience in
statistics and modelling and is proficient at writing scientific texts. The
work will be carried out in collaboration with Dr. Karin Harding (Dep. Marine
Ecology, GU) and Prof. Bernt Wennberg (Mathematical Sciences, Chalmers GU).
International collaborators on the program are Prof. Mike Begon (Liverpool
U.) and Prof Nils Cristian Stenseth (Oslo U).
The position is for 18 months. The successful candidate will be based at the
Dep. of Marine Ecology in Gothenburg and will be encouraged to participate in
joint workshops, seminars and meetings at the Center for theoretical biology
http://www.ctbio.science.gu.se/theoretical_biology/
Feel free to contact Karin Harding (karin.harding@marbot.gu.se) for further
details.
Application
Send CV, two reprints, a one page statement of research interests and the
names of three referees directly to: The Registrar, University of Gothenburg,
Box 100, SE-405 30 Gothenburg, Sweden,
stating reference number for the position E36 1191/08. Deadline for
applications 15 April 2008.
Trade union representatives: SACO Martin Björkman tel. +46 31-7863608,
SEKO Lennart Olsson tel +46 31-7861173, OFR-S Eva Sjögren tel
+46 31-7861169.
Post-doctoral Research Assistant: University of Dundee
SMB Digest Vol 8, Issue 12 - March 20, 2008
Post-doctoral Research Assistant, 3 Year Position.
"Guidance Cues and Pattern Prediction in the Developing Retinal Vasculature:
A Combined Experimental and Theoretical Modelling Approach"
Professor Mark A.J. Chaplain, Dr. A.R.A. Anderson, Dr. S. McDougall
Division of Mathematics University of Dundee,
Institute of Petroleum Engineering Heriot-Watt University
Applications are sought for the position of post-doctoral research assistant
to work on an exciting inter-disciplinary research project concerning the
modelling of blood vessel growth and development in the retina. We seek a
talented individual with a PhD and background in applied mathematics, physics
or other numerate discipline to work in a lively, multi-disciplinary research
environment with three research-active supervisors in
internationally-acclaimed departments (Mathematics Grade 5, Petroleum
Engineering Grade 5* in the last RAE). A knowledge of ordinary and partial
differential equations as well as computational/programming training would be
an advantage. An interest in biology and the desire to work with
experimentalists is necessary.
The project is in collaboration with Dr. Christopher Mitchell, University of
Ulster, who will be undertaking the experimental aspects of the project.
Applications, with full CV and the names of two potential referees, should be
sent to:
Professor Mark Chaplain, Division of Mathematics, University of Dundee,
Dundee DD1 4HN, Scotland
chaplain@maths.dundee.ac.uk
tel: 01382 385369
by Friday 11th April 2008.
Research Positions: Theoretical Systems Biology, Dresden
SMB Digest Vol 8, Issue 12 - March 20, 2008
Three research positions "Theoretical Systems Biology"
at Dresden University of Technology, Germany
Applications from highly qualified candidates are invited for
* two full postdoctoral fellow positions for up to three years and
* one PhD position for three years
in theoretical systems biology, mathematical biology and computational cell
biology.
The goal is to discover, in close collaboration with experimental and medical
partners, novel biophysical and biochemical mechanisms of information and
material transport between subcellular compartments such as the plasma
membrane, Golgi and nucleus as well as the spatio-temporal regulation of such
mechanisms. The new members of our group will coordinate and conduct the
above research and complement running projects which utilise a broad spectrum
of theoretical tools with a focus on multi-scale modelling of spatio-temporal
pattern formation.
The ideal postdoctoral candidate holds a Ph.D. in physics, applied
mathematics or biology (or similar), has demonstrated expertise in systems
biology, biophysics, nonlinear dynamics, stochastic methods or network
analysis and has a strong interest in molecular cell biology. The Ph.D.
candidate should possess a masters or diploma degree in physics or applied
mathematics. A high level of motivation and commitment are required. Strong
communication skills are important for the close collaborations with
experimentalists and medical doctors.
The envisaged research will be conducted at the interdisciplinary Center for
Information Services and High Performance Computing (ZIH), Dresden University
of Technology, Germany, which hosts a department focusing on the mathematical
modelling of biological systems (head: Andreas Deutsch). The Dresden campus
is characterized by a vibrant international community of researchers that
performs cross-disciplinary research at the highest level in state-of-the-art
research centers. The city of Dresden and its surroundings are also rich in
culture and impressive scenery. ZIH is an equal opportunity employer and
strives to increase the number of women in research. We also encourage and
invite applications from disabled individuals, who will be given priority if
suitably qualified.
The positions are available from June 1, 2008. Deadline for applications (by
email, including contact details of two references): April 10, 2008.
Contact:
Andreas Deutsch
Center for Information Services
and High Performance Computing (ZIH)
Dresden University of Technology, Germany
Tel.: +49 351 463-31943
Fax.: +49 351 463-38245
Email: andreas.deutsch@tu-dresden.de
WWW: http://theobio.mtbio.de/imc
Positions: Computational Neuroscience, CNCR, Amsterdam
SMB Digest Vol 8, Issue 10 - March 10, 2008
Applications are invited for two research positions in the Neuroinformatics
Group of the Center for Neurogenomics and Cognitive Research (CNCR), VU
University Amsterdam. The positions are funded by a EU-FP7 grant for the
Collaborative Large-scale Integrating Project Self-Constructing Computing
Systems (SECO). Using a combined computational and experimental approach, the
SECO project investigates the principles by which populations of real or
artificial neurons can grow and assemble themselves into functioning
circuits.
The first 4-year project, for a postdoctoral researcher, is on the
development of dendritic and axonal growth models. The aim is to create
models for neuronal morphogenesis in which cells develop through growth cone
migration and branching, and formation of synaptic connections in interaction
with their environment. A major challenge is to find a balanced level of
description of neuronal outgrowth based on local mechanisms and interactions
in space and time that will be suitable for an algorithmic implementation.
The models will be used to study the development of cortical and thalamic
circuitry. The ideal candidate should combine a strong neurobiological
interest and knowledge with a solid background in neuro-biophysics and
extensive experience in computational modeling and computer programming.
The second 4 (or 3)-year project, for a PhD student (or postdoctoral
researcher), focuses on the reciprocal interactions between neuronal network
structure and activity dynamics in developing neural circuits. Using
computational models, we will explore the impact of activity-dependent
plasticity rules on the evolution of developing neuronal networks under their
own (spontaneous) firing activity. The research will be guided by the
hypothesis that networks will evolve towards self-consistent states, in which
firing patterns stabilizes the synaptic connectivity structure that also
gives rise to these firing patterns. The ideal candidate should combine a
strong neurobiological interest and knowledge with an excellent background in
computational neuroscience and neuronal network research.
Candidates of both projects will contribute significantly to the
collaborative effort of the SECO consortium.
For further information about these positions, please contact Dr. Arjen van
Ooyen, arjen.van.ooyen@cncr.vu.nl, or Dr. Jaap van Pelt,
jaap.van.pelt@cncr.vu.nl. Application letters including a CV, research
experience, a short statement of research interests, and contact details of
two referees should be sent by email to Dr. Arjen van Ooyen before the 1st of
April 2008.
Postdoc Position: Applied Mathematics, Northwestern University
SMB Digest Vol 8, Issue 9 - March 3, 2008
The Department of Engineering Sciences and Applied Mathematics at
Northwestern University expects to recruit a Postdoctoral Fellow for
appointment beginning in fall, 2008 as part of an NSF sponsored Research
Training Grant project.
This project will provide support for the Postdoctoral Fellow for a period of
up to three years. The successful candidate will teach an average of one
course per quarter and will have the opportunity to work in interdisciplinary
research teams on cutting edge applied mathematics research in the life
sciences and mechanics.
Applicants will be considered until the position is filled. This position is
restricted to U.S. citizens and permanent residents.
Please contact Alvin Bayliss (a-bayliss@northwestern.edu) for further
details.
Northwestern University is an Affirmative Action/Equal Opportunity Employer.
Applications from women and under-represented minorities are encouraged.
PhD Fellowships & Postdoctoral Positions: CoSBi, Italy
SMB Digest Vol 8, Issue 8 - February 25, 2008
PhD fellowships and Postdoctoral positions are available at the Microsoft
Research - University of Trento Centre for Computational and Systems Biology
(http://www.cosbi.eu/) in Trento, Italy to conduct research in the following
areas:
- Modeling cell cycle regulation of yeast and mammalian cells; Modeling
polarized cell growth; Cancer tissue modeling.
Details at: http://www.cosbi.eu/Rpty_Activ_Dynmol.php
Informal enquiries: Attila Csikasz-Nagy (csikasz at cosbi dot eu)
- Evolution and dynamics of chemotaxis; Dynamics and structure of signaling
pathways; Robustness against gene deletion.
Details at: http://www.cosbi.eu/Rpty_Activ_Pathway.php
To fill the advertised positions, we are looking for enthusiastic scientists,
trained in biology, mathematics, physics, computer science, or closely
related areas.
Formal applications and general inquiries should be made through the web site
of the Centre: http://www.cosbi.eu/Careers_Home.php
Postdoc Position: Biophysics/Computational Biology, Virginia Tech
SMB Digest Vol 8, Issue 8 - February 25, 2008
A postdoc position is immediately available in my lab working on a project
studying protein fluctuations and its effect on cellular network dynamics. A
perspective candidate should have strong background in at least one of the
following fields: statistical physics, physical chemistry and chemical
dynamics, and molecular biophysics.
Candidates good at both analytical and numerical analysis are especially
welcomed. Contact: Dr Jianhua Xing, Email:
jxing@vt.edu, webpage: http://www.biol.vt.edu/faculty/xing
Postdoctoral Position: Cell Cycle Regulation, Virginia Tech
SMB Digest Vol 8, Issue 8 - February 25, 2008
A postdoctoral position is available immediately in John Tyson's Research
Group at Virginia Tech to conduct research in the area of mammalian cell
cycle regulation. The work involves modeling molecular regulatory pathways
using nonlinear ordinary differential equations.
Candidates must have a Ph.D. degree, experience in mathematical modeling,
working knowledge of nonlinear dynamics as well as cell physiology and
molecular biology, and an interest in applying models to problems in the
molecular biology of cancer.
Interested applicants must apply online at www.jobs.vt.edu, posting #080127.
Complete the faculty application and attach a cover letter, resume/vita and
list of 3 references. Review of applications will begin on March 9, 2008.
Virginia Tech is an Equal Opportunity/Affirmative Action Institution
Postdoctoral Research Fellowship: Bioconvection, University of Glasgow
SMB Digest Vol 8, Issue 8 - February 25, 2008
University of Glasgow
Department of Mathematics
Grade 6; £23,692 - £26,666 per annum
Grade 7; £29,139 - £32,796 per annum
REF: 14084/DPO/A3
Applications are invited for an EPSRC funded postdoctoral research fellowship
on "Bioconvection: hydrogen production and high concentrations in suspensions
of swimming microorganisms." It is the aim of this project to investigate the
coupling between algal swimming behaviour, bioconvective pattern formation,
and hydrogen gas production in sulphur-stressed suspensions of dilute and
concentrated green algae, with a view to improve the hydrogen yield.
Applicants are expected to have an excellent record of achievement in the
fields of Mathematical Biology, Modelling and Fluid Dynamics. Practical
knowledge of analytical and numerical techniques in Stokes flow is desirable.
Applicants with both theoretical and experimental experience in a biological
or fluids area are especially encouraged to apply, although a first-rate
applicant with a theory only track record will stand an equal chance. The
successful applicant will be expected to work with others to achieve several
objectives.
The post is funded by the EPSRC (for 3 years at grade 6; or 2.5 years at
grade 7) from 1st May 2008, or soon thereafter.
Further details, including project information, can be obtained via
http://www.maths.gla.ac.uk/ or by contacting Dr Bees
(m.bees@maths.gla.ac.uk).
Applications should be submitted to Dr Martin A Bees, Department of
Mathematics, University of Glasgow, Glasgow G12 8QW.
Closing date: 18th March 2008
More information on the position can be found at
Grade 6:
www.gla.ac.uk/jobs/vacancies/researchandteaching/14084g6ra/#d.en.66814
Grade 7:
www.gla.ac.uk/jobs/vacancies/researchandteaching/14084ra7/#d.en.66817
Postdoctoral Fellowship: Systems Biology, U Western Ontario
SMB Digest Vol 8, Issue 8 - February 25, 2008
Postdoctoral Fellowship in Systems Biology of Blood Flow Regulation
University of Western Ontario, London, Canada
The microcirculatory physiology group in the Department of Medical Biophysics
at the University of Western Ontario is seeking applications for a
postdoctoral position in the development of numerical simulations of
intracellular biochemical pathways and cell-cell signaling. This position is
supported by a grant from the National Institutes of Health and is available
for two years with the possibility of an additional year.
The goal of this project is to develop an integrated, multi-scale model of
local regulation of microvascular oxygen delivery in health and disease. The
successful candidate will be involved in utilizing data from experimentalists
on the project to develop detailed mathematical and computational models of
the dynamics of ATP production and release by erythrocytes, including control
mechanisms, spatial distribution, and binding to the vascular endothelium.
For this position, a Ph.D. in biophysics, chemistry, or related fields, with
a strong background in mathematical modeling, is preferred. Experience in
modeling chemical kinetics and knowledge of ATP signaling and/or erythrocyte
signal transduction are a plus. The candidate is expected to have strong
programming skills.
Interested candidates should send a letter of application and current CV by
email to Dr. Daniel Goldman (dgoldma2@uwo.ca). Please include the names of
2-3 potential referees, but reference letters need not be sent at this
stage. Review of applications will begin on March 15, 2008 and continue
until the position is filled.
Systems Biology Posts: Aberdeen and CISBIC
SMB Digest Vol 8, Issue 7 - February 18, 2008
We are currently recruiting to the large interdisciplinary Combinatorial
Responses In Stress Pathways (CRISP) team which will be jointly based at the
University of Aberdeen and at CISBIC, Imperial College London. are seeking
ambitious and committed scientists to join the CRISP team. This team will
include four experimental biologists, four applied mathematicians, six PhD
students supervised by the ten group leaders. The project will study the
Systems Biology of stress responses in the medically important fungi Candida
albicans and Candida glabrata. We will combine advanced modelling techniques
with state-of-the-art genomics, molecular biology, biochemistry and cell
biology in these pathogens. This project is funded by the BBSRC under the
SABR initiative for up to five years.
A PDF summary of the available posts can be found at
http://www.ma.ic.ac.uk/~jstark/PDF/SABR%20Advert%20Final.pdf
Postdoctoral Positions: Warwick Systems Biology Centre
SMB Digest Vol 8, Issue 7 - February 18, 2008
The Warwick Systems Biology Centre (WSB) has recently received three large
grants from the SABR (Systems Approaches to Biological Research) initiative
funded by BBSRC and EPSRC. These are to study (i) the dynamics and function
of the NF-kB signaling system (with Prof. M White, Liverpool). (ii) the
robustness of plant signaling systems to temperature changes (led by Dr K
Halliday, Edinburgh), and (iii) the mechanisms determining the switching
between different stress responses in plants. As a results we have available
a number of postdoctoral posts for people with a strong mathematical,
statistical or computational background. The people appointed to these will
be involved in modeling, analysis of cutting-edge biological data and
experimental design and will be involved in all aspects of the biological
projects. There is also a post for a bioinformatics technician. Anyone
interested in any of these posts should contact Professor David Rand
(d.a.rand@warwick.ac.uk) as soon as possible for further details.
Please reply to d.a.rand@warwick.ac.uk
Professor David Rand
* Warwick Systems Biology & Mathematics Institute,
* EPSRC Senior Research Fellow,
* Co-director, Warwick Systems Biology,
* Address: Warwick Systems Biology, Coventry House,
University of Warwick, Coventry CV4 7AL, UK
* tel: +44 (0)24 7652 3599 fax: +44 (0)24 7652 4182
* email: dar@maths.warwick.ac.uk
* secretary/PA: J.A.Maynard@warwick.ac.uk, tel: +44 (0)24 7652 8321
* web: http://www2.warwick.ac.uk/fac/sci/systemsbiology/staff/rand/
Postdoc Position: ISTM, Keele
SMB Digest Vol 8, Issue 6 - February 11, 2008
The Institute of Science and Technology in Medicine (ISTM) at Keele
University (www.keele.ac.uk/research/istm) is seeking to appoint a
Postdoctoral Research Assistant in the area of biomechanics and
mechanobiology. The work forms part of the MyJoint project (www.myjoint.org).
MyJoint is an EU-funded multi-disciplinary project combining ten partners and
aims to grow biological replacement joints within the patients that will use
them. You will work under the guidance of Dr. Jan Herman Kuiper, Prof. Alicia
el Haj and Prof. James Richardson. Your work will aim to further our
understanding of the interaction between mechanical conditions and articular
joint formation and you will collaborate with engineers, biologists and
clinicians.
You will develop novel computer models to simulate the relation between
skeletal cells, physical environment, geometry, and material properties in
joint formation. You will use computer models to find the effects of
variations in parameters describing cells, environment and geometry on joint
formation and tissue quality. You will also assist in assessing mechanical
quality of tissue from and around joints produced under experimental
conditions. You will compare the findings of the computer model to
experimental results, and adjust the model if required.
You will have a PhD degree, with a background in the physical, mathematical
or engineering sciences. You should have experience in the execution of a
researched project involving mathematical or computational simulation,
ideally of biological processes. You should be familiar with the use of
Finite Element simulation tools or alternative multi-physics tools to
simulate biological processes. Experience in mechanical testing procedures of
biological tissues would be an advantage.
ISTM is a 5* highly rated (5A or 5* over the last three RAEs),
interdisciplinary Institute housing biological and physical scientists,
clinicians and engineers. You will be based at our site at the Robert Jones
and Agnes Hunt Orthopaedic Hospital in Oswestry, a renowned Orthopaedic
Hospital with several active clinical and research programs in orthopaedic
cell therapy (www.oscell.enta.net).
Informal enquiries may be directed to Dr. Jan Herman Kuiper
(j.h.kuiper@keele.ac.uk)
Full job packs are available from the Human Resources Department, Keele
University, Keele, Staffordshire, ST5 5BG. Fax: 01782 583471 or e-mail
vacancies@keele.ac.uk or www.keele.ac.uk/depts/uso/hr/cwisvacs.htm
Please quote post reference: RE08/05INT
Closing date for applications: 25 February 2008
Postdoc / Research Assistant: Cambridge Systems Biology Centre
SMB Digest Vol 8, Issue 6 - February 11, 2008
Applications are invited for the position of a postgraduate or postdoctorate
researcher in the group of Dr. Karen Lipkow in the Cambridge Systems Biology
Centre. The person appointed will utilise a large computer grid to study the
interplay of signalling and cellular architecture through detailed
simulations. The project is funded by the EU-IndiaGrid and involves
collaboration with the National Centre for Biological Sciences in Bangalore,
India.
The ideal candidate has good programming skills (especially C/C++),
experience with Grid Computing and an interest in computational cell biology.
However, suitable training will be given where required.
The post is for 6-8 months in the first instance, with a possibility of
extension subject to the availability of funds. The position is available
immediately.
Applications should include a covering letter describing relevant research
experience to date, a CV, completed PD18
form (Part 1 and 3)
and the names and addresses of two referees. These should be sent quoting the
reference by email by 29th February 2008 to jobs@bioc.cam.ac.uk or post to
The Principal Assistant, Department of Biochemistry, Building O, Downing
Site, Tennis Court Road, Cambridge, UK, CB2 1QW.Informal enquiries can be
directed to K. Lipkow: KL280@cam.ac.uk.
Quote Reference: PH02992 Closing Date: 29 February 2008
Software Developer/Research Associate/Post Doctoral Fellow, Indiana U
SMB Digest Vol 8, Issue 6 - February 11, 2008
The Indiana University Biocomplexity Institute seeks a Research Assistant,
Research Associate or Post Doctoral Fellow to participate in research on the
development and improvement of the Tissue Simulation Environment
(compucell3d.org). Rank is commensurate with experience. There is a
possibility that two positions will be filled.
Preferred skills and abilities include extensive experience in C++, Python,
user interface design and implementation. Candidate should be able to
interact with users and help prepare training workshops. Should be able to
work in a small team environment with limited supervision. Position will
offer opportunities to collaborate on new research projects and participate
in publications with Biocomplexity Institute scientists. Areas of interest
include Monte Carlo methods, statistical mechanics, fluid dynamics, partial
differential equations, mathematical modeling of biological systems, computer
graphics visualization, and scientific software development.
Skills in numerical modeling, graphics and visualization, or parallel
programming are a plus, as is having a strong (Masters or Ph.D.) scientific
background. Technical writing and documentation Review of applicants will
begin immediately and continue until position is filled. [Initial
appointment will begin March 1'st , 2008 (precise starting date negotiable)]
and is expected to last one year with extension possible, subject to
satisfactory performance. Please send a CV and arrange to have 3 letters of
recommendation sent to glazier@indiana.edu or by mail to Prof. James Glazier,
Biocomplexity Institute, Indiana University, Bloomington, IN 47405, U.S.A.
Indiana University is an equal opportunity / affirmative action employer.
Postdoc and PhD Positions: Mathematical Biology, Helsinki
SMB Digest Vol 8, Issue 5 - February 4, 2008 The Mathematical Biology Group at the Department of Biological and
Environmental Sciences, University of Helsinki, Finland (leader Dr. Otso
Ovaskainen) is seeking outstanding, highly motivated candidates to join
research projects at the interface between mathematics and ecology and
evolutionary biology. Successful candidates may have their training either in
mathematics or in biology, the main criteria being the potential to perform
top-quality research. We anticipate hiring up to 4 postdoctoral researchers
or Ph.D. students over the next 3 years. Research projects will be developed
in conjunction with the interests of the successful candidates, focused on
the following areas:
1. The roles of space and stochasticity in population dynamics
2. Metacommunity dynamics of wood-decaying fungi
3. Animal movement in heterogeneous environments
4. Bayesian approaches in evolutionary quantitative genetics
The PhD student positions are available for 4 years. The postdoc positions
are for 1 year, with the possibility of a 2-year extension.
The Mathematical Biology group is part of the Metapopulation Research Group
(leader Prof. Ilkka Hanski), which is a Centre of Excellence in Research
supported by the Academy of Finland. We offer an international research
environment with excellent possibilities to cooperate with experts in
mathematics, statistics, population biology, and evolutionary ecology. Salary
and social benefits according to the University of Helsinki Salary system,
around 2,300 Euro/month for PhD students and 3,100 Euro/month for post docs
(the latter negotiable).
Applications including a short CV (max 3 pages), list of publications, and
the e-mail addresses of two researchers willing to write a letter of
reference should be sent to otso.ovaskainen@helsinki.fi with cc to
tuuli.ojala@helsinki.fi; write either "postdoc position" or " PhD student
position" on the subject line. For more details on the research projects and
on the application procedure, see
http://www.helsinki.fi/science/metapop/MBG/positions/index.htm
Deadline for applications 14th March 2008, starting date 1st May 2008
(negotiable).
Postdoctoral Fellowship: Modeling of Viral Transcriptional Circuitry
SMB Digest Vol 8, Issue 4 - January 30, 2008 Dr. Leor S Weinberger's laboratory (recently moved from Princeton) seeks
applicants for a postdoctoral fellowship (2-3 years) exploring HIV and viral
transcriptional regulation. The specific research project is flexible and can
be tailored to the interests of the individual, but should fall under the
broad fields of transcriptional regulation and circuitry. Our lab is a joint
theoretical and experimental lab ( http://chem-faculty.ucsd.edu/weinberger)
that stresses close interaction between theorists and experimentalists and
houses all the computational resources and the wet-lab experimental
infrastructure (including several confocal microscopes for live single-cell
time-lapse imaging) required for joint theoretical/experimental projects.
Applicants will be considered from a diverse spectrum of backgrounds
(including PhDs in mathematics, statistics, physics, biology or related
areas) but preference will be for highly motivated applicants with excellent
communication skills. The ideal candidate should also have good interaction
capability with experimentalists and a proven record of independent research.
The postdoctoral fellowship provides a competitive annual stipend plus
benefits and health insurance. Start date and term are negotiable.
Applications are welcome from candidates of any nationality, and will be
reviewed on a rolling basis. UCSD offers an outstanding intellectual
environmental with many top-five ranked scientific departments (including
Biochemistry and Bioengineering), a highly regarded medical school, a Center
for Theoretical Biological Physics (CTBP), and close proximity to the Salk
and Scripps Institutes. Highly motivated applicants are encouraged to email
a statement of research interests, CV, and contact details for three
references to lsw (at) ucsd.edu. Informal inquiries are also welcome.
Postdoc: Biomathematical Modeling, BWH & Harvard Medical School
SMB Digest Vol 8, Issue 4 - January 30, 2008 POSTDOC OPPORTUNITY (1 opening) in BIOMATHEMATICAL MODELING
with Elizabeth Klerman, Division of Sleep Medicine, Brigham and Women's
Hospital and Harvard Medical School
Projects cover a range of topics in dynamics of circadian rhythms and sleep
at the network level, utilizing physiologically-based models, in
deterministic and stochastic frameworks. Projects typically involve close
collaboration with experimentalists, both analyzing and modeling data as well
as designing experiments. The Division of Sleep Medicine is
interdisciplinary, with members from backgrounds in applied mathematics,
computer science, statistics, physiology, psychology and medicine. The rich
environments of the Division of Sleep Medicine (http://sleep.med.harvard.edu)
and the Harvard Medical School (www.hms.harvard.edu) offer many opportunities
for career development through seminars, lab meetings, formal courses and
interaction with other groups.
Currently seeking applicant for:
Modeling of dynamical circadian rhythms and sleep processes. Potential
projects involve multi-dimensional data sets of human circadian rhythms,
sleep, neurobehavioral performance and alertness. We are interested in
quantifying inter-individual differences and using these to predict
performance and sleep.
Current funding for this work is from NSBRI (NASA), AFOSR and NIH. A
desirable candidate will have skills and knowledge in applied mathematics and
statistics. Applicants with additional background and experience with
engineering, signal processing, dynamical systems, simulation, and/or
computational modeling are especially encouraged to apply. Knowledge of
MatLab is appreciated. A course in circadian rhythms and sleep will be
offered in fall 2008 that the candidate will be expected to attend. The
initial appointment is for 2 years, renewable annually thereafter.
Interested candidates should send a letter of interest, curriculum vitae, and
contact information for three references to:
Elizabeth B Klerman MD PhD,
Division of Sleep Medicine,
Brigham and Women's Hospital,
221 Longwood Ave,
Boston MA 02115,
Email: Ebklerman@hms.harvard.edu
Harvard Medical School and Brigham and Women's Hospital are Affirmative
Action/Equal Opportunity Employers.
We strongly encourage applications from women and minority candidates.
Postdoc Position: Biocomplexity Institute, Indiana University
SMB Digest Vol 8, Issue 4 - January 30, 2008 Software Developer/Research Associate/Post Doctoral Fellow
The Indiana University Biocomplexity Institute seeks a Research Associate or
Post Doctoral Fellow to participate in research on the development and
improvement of the Tissue Simulation Environment (compucell3d.org). Rank is
commensurate with experience. There is a possibility that two positions will
be filled.
Preferred skills and abilities include extensive experience in C++, Python,
user interface design and implementation. Candidate should be able to
interact with users and help prepare training workshops, and should be able
to work in a small team environment with limited supervision. Position will
offer opportunities to collaborate on new research projects and participate
in publications with Biocomplexity Institute scientists. Areas of interest
include Monte Carlo methods, statistical mechanics, fluid dynamics, partial
differential equations, mathematical modeling of biological systems, computer
graphics visualization, and scientific software development.
Skills in numerical modeling, graphics and visualization, or parallel
programming are a plus, as is having a strong (Masters or Ph.D.) scientific
background. Technical writing and documentation experience also preferred.
Review of applicants will begin immediately and continue until position is
filled. Initial appointment will begin as early as January 7, 2008, and is
expected to last one year with extension possible, subject to satisfactory
performance.
Please send a CV to Randy Heiland (heiland@indiana.edu).
Indiana University is an equal opportunity / affirmative action employer.
Postdoc Opening: Interaubio Project, University of Lyon 1
SMB Digest Vol 8, Issue 3 - January 22, 2008 The Interaubio project gathers teams of modellers and biologists to better
understand the functioning, dynamics and evolution of infection by small RNA
viruses in mammals. This call for a postdoc of one year (with the possibility
of extending it for one more year) is part of this collaborative and strongly
interdisciplinary project that involves more than 14 permanent researchers.
The core of the project associates experimental research on the interactome
of host/virus pathogens with an integrated modelling of different biological
networks (protein-protein, metabolic and genetic) in terms of both their
structure and their dynamics. The relative simplicity of the biological
system studied (the number of viral proteins is small) and the availability
of original data from the biological labs participating in this ambitious
project offers it a good feasibility.
The specific objective of the postdoc is to integrate into the modelling
process data coming from the literature on gene expression. The successful
candidate will be in charge of doing a meta-analysis of the whole set of
published data on the transcriptome of infected cells. He/she will build a
database that integrates both published experimental data and computer
generated results. The database query system should be applicable to both
types of data, including data from previously integrated computer analyses,
for instance, to enable an exploration of sets of differentially expressed
genes. The results of such queries may lead to the development of further
experiments by the wet-lab partners. The postdoc candidate will also work in
strong relationship with the researchers developing models for the
interactome.
The skills required are a good level in bioinformatics which includes a solid
background in the statistics of the transcriptome and a good knowledge of
database development (within a relational framework, the SGBDI that will be
used will be postgres) . A taste for participating in a strongly
interdisciplinary and collaborative project is absolutely necessary.
Person to contact for further information:
Christian Gautier,
UMR 5558 Biometrie et Biologie Evolutive,
Universite Claude Bernard, Lyon I,
43, Bd du 11 novembre 1918,
69622 Villeurbanne cedex,
France,
Fax: +33 (0)4 72 43 13 88.
email: cgautier@biomservuniv-lyon1.fr
Postdoc Position: Mathematical Modeling (Kidney Function), Duke
SMB Digest Vol 8, Issue 2 - January 15, 2008 Applications are solicited for a postdoctoral position in mathematical
biology that involves modeling various aspects of kidney function, and
teaching one course per year.
A Ph.D. in mathematics (or a related quantitative field) and proficiency in
computer programming and scientific computing are required; experience in
mathematical modeling is desirable. The initial appointment is for two
calendar years beginning June 1 (negotiable); it may be renewable.
Please submit an AMS standard coversheet, a curriculum vita, a description of
current and completed research (1-3 pages), and four letters of
recommendation, one of which evaluates teaching skills.
The AMS Standard Cover Sheet should be completed online at
www.mathjobs.org/jobs/duke/. Applicants are encouraged to submit other
materials electronically at this site; they may also mail them to:
Prof. Anita Layton, Department of Mathematics,
Box 90320 Duke University, Durham, NC 27708-0320
Duke University is an affirmative action/equal opportunity employer.
Post-Doctoral Associate: University of Pittsburgh RTG
SMB Digest Vol 8, Issue 2 - January 15, 2008 RTG Post-Doctoral Associate (www.math.pitt.edu/~cbsg -- coming soon!)
The Department of Mathematics at the University of Pittsburgh invites
applications for postdoctoral appointment starting the Fall Term 2008 subject
to final funding approval. The appointment is renewable annually to a maximum
of three years. The position will likely be funded jointly by the University
of Pittsburgh and a new NSF Research Training Group (RTG) grant on Complex
Biological Systems across multiple space and time scales.
The research areas covered by the RTG include (i) the development and
analysis of mathematical models and computational algorithms for solving
spatio-temporal problems arising in biology and (ii) the applications of
these and other methods to problems arising in inflammation and
neuroscience.
To be successful, a candidate must demonstrate excellence in research, and
must also have strong commitment to excellence in teaching at both the
undergraduate and graduate levels. Candidates should be willing to work
closely with experimentalists and clinicians. All applications must include
the following: (1) a curriculum vita, (2) a personal statement addressing
their research agenda, (3) a statement of teaching philosophy, (4) a
completed AMS Standard Cover Sheet form and (5) at least three letters of
recommendation. Applications should be submitted electronically through
http://www.mathjobs.org. If the candidate is unable to submit electronically,
materials may be sent to: Postdoctoral Search Committee in Complex Biological
Systems, Department of Mathematics, University of Pittsburgh, Pittsburgh, PA
15260. Review of completed files will begin on January 10, 2008 and continue
until the position is filled.
The University of Pittsburgh is an Affirmative Action, Equal Opportunity
Employer. Women and members of minority groups under-represented in academia
are especially encouraged to apply. NSF restrictions require that eligible
candidates must be US citizens or permanent residents.
Postdoctoral Position: Mathematics, Critical Care Medicine, U Pitt
SMB Digest Vol 8, Issue 2 - January 15, 2008 The Centre for Inflammation and Regenerative Modeling and the Departments of
Mathematics and Critical Care Medicine at the University of Pittsburgh are
seeking applications for a two-year post-doctoral position. Specific research
topics include modeling of immune response to influenza virus infection and
pulmonary inflammation modeling. The successful candidate will operate in a
truly interdisciplinary environment in an established and successful
mathematical biology group. A strong background in dynamical systems
modeling, an interest in data assimilation, and significant expertise in
computational implementation of optimization algorithms including Monte Carlo
techniques in a grid environment would constitute strong assets. Minority
and female applicants are encouraged. Salary and fringe benefits are very
competitive. Please direct enquiries to:
Bard Ermentrout or David Swigon, Department of Mathematics
University of Pittsburgh, bard@math.pitt.edu, swigon@pitt.edu
Gilles Clermont, MD
Department of Critical Care Medicine
Medical Director, Center for Inflammatory and Regenerative Modeling
University of Pittsburgh
clermontg@upmc.edu
Postdoctoral Position: Biomathematics, UCLA
SMB Digest Vol 8, Issue 1 - January 9, 2008 A postdoctoral research position is open in the group of Prof. Tom Chou
(http://www.biomath.ucla.edu/tchou) in the Dept. of Biomathematics at UCLA.
Although the position is research grant-funded, the research scope is quite
broad, so self-motivated applicants with a strong background in applied
mathematics, statistical mechanics/stochastic processes, numerical/simulation
techniques, and cellular biology are sought. Funded research areas include,
but are not limited to time-inhomogeneous stochastic processes and their
applications to cell and population biology, the physical mechanisms of viral
replication and entry, RNA interactions and structure, cellular transport,
and tissue mechanics and growth.
The position is available immediately or in the coming months, and
affiliation with the Dept. of Mathematics is possible. Salary will be
commensurate with experience and qualifications. Please email CV and list of
publications to: tomchou@ucla.edu
Please also have three references emailed to the same address.
Postdoctoral Fellowship: Evolutionary Theory, Queen's University
SMB Digest Vol 8, Issue 1 - January 9, 2008 Applications are sought from outstanding researchers for a 2-year
postdoctoral position in evolutionary theory, working in the lab of Dr. Troy
Day in the Departments of Mathematics and Statistics and the Department of
Biology at Queen's University (www.mast.queensu.ca/~tday). The specific
research topic is wide open, with current projects in the lab focusing on
developing theory for kin selection and spatial models of evolution,
host/parasite epidemiology and (co)evolution, evolutionary immunopathology,
genomic imprinting and nongenetic inheritance, and coral bleaching. The
successful applicant will be free to conduct research in any of these or
other related areas of interest. Ideally the position will be taken up by
Sept. 1, 2008 but there is some flexibility in start date. Salary will be
C$40,000 per year.
Information about the Department of Mathematics and Statistics, the
Department of Biology, and Queen's University can be found at
www.mast.queensu.ca, http://biology.queensu.ca and www.queensu.ca
respectively.
To apply, send a current CV and a statement of research interest to Troy Day
via email (tday@mast.queensu.ca). Please include the names of 2-3 potential
referees, but applicants need not solicit reference letters at this stage.
Review of applications will begin on February 15, 2008 and continue until the
position is filled.
Postdoctoral Fellow: Mathematical Models in Spatial Ecology, Ottawa
SMB Digest Vol 8, Issue 1 - January 9, 2008 Applications are invited for a postdoctoral fellowship in mathematical
ecology at the University of Ottawa in the Department of Mathematics and
Statistics. The goal of this interdisciplinary project, which is funded by
the Ontario Ministry of Research and Innovation, is to construct and analyze
mathematical models for food-webs in river ecosystems. The research will
address questions of how different natural and human disturbances and climate
change affect population persistence, non-native species invasion, and the
composition of existing food-webs on several temporal and spatial scales.
The position is based in Ottawa, Canada's capital, but research
collaborations exist with several other research groups in North America
(e.g., Calgary, Edmonton, Santa Barbara). It is expected that the successful
candidate will spend time visiting these groups for collaboration and
exchange.
Applicants should hold a PhD in Applied Mathematics or a related field with
strong background in modeling, analysis (ODEs, PDEs), and computation.
Previous exposure to ecological models or previous collaborations with
experimentalists (biologists, ecologists) are an asset. The position is for
one year with a possibility of renewal for a second year. The position
includes teaching duties of one one-semester course per year. Salary is
approximately $42,000 per year plus benefits. A small budget for conference
travel is also available.
The application should include a detailed CV together with a cover letter
stating research interests, as well as three names of potential references.
Electronic applications are strongly encouraged. Review of applications will
start immediately and will continue until the position has been filled. For
further information or to apply please contact Prof. Frithjof Lutscher
(flutsche@uottawa.ca).
Employment equity is University policy and the University strongly encourages
applications from women, minorities and other underrepresented groups.
PhD/Postdoc Position: Simulating Cardiac Arrhythmias, Simula Research
SMB Digest Vol 8, Issue 1 - January 9, 2008 Simula Research Laboratory conducts basic research in the fields of
communication technology, software engineering and scientific computing. The
research in the Scientific Computing (SC) department is focused on the
development of numerical methods, algorithms and software, and large-scale
biomedical and systems biology oriented simulation studies applying these
methods. To further strengthen our research in the area of cardiac modeling
we seek a candidate for an available PhD or Postdoc position. The research
will be focused on simulating cardiac arrhythmias using a biophysically
detailed model of the human heart, and will be supervised by a new member of
our research group; Dr Kirsten ten Tusscher. Despite the large socioeconomic
costs of people suffering from cardiac arrhythmias and sudden cardiac death
and despite decades of research the causes and mechanisms of cardiac
arrhythmias are still poorly understood. The goal of the current research
project is to contribute to a better understanding of the anatomical
structures and biological processes important in causing arrhythmias. More
specifically, in the project we will look at the role of anatomical
heterogeneities present in cardiac muscle (capillaries, connective tissue,
intricate anatomical structures such as Purkinje system, and the papillary
and trabecular muscles of the heart) in arrhythmia dynamics. In addition, we
will study the complex role of intracellular calcium (involved in excitation,
contraction and metabolism) in arrhythmia dynamics.
Simula offers excellent opportunities for doing high quality research,
generous support for travels and equipment, and competitive salary (around
47.000,- Euro/69.000,- USD for a Ph.D. position and 58.000,- Euro/84.500,-
USD for a Postdoc position).
We are looking for candidates with a strong interest in biological and
biomedical research and a University degree in physics, applied mathematics,
computer science, artificial intelligence, biomedical engineering, or
computational biology. The position requires excellent English writing skills
and high marks from the BSc and MSc degree. Women are encouraged to apply.
For more information visit http://www.simula.no/jobs or contact Kirsten ten
Tusscher (tentussc@simula.no) or Joakim Sundnes (sundnes@simula.no). To apply
for these positions, email a short application letter, curriculum vitae,
copies of transcripts and grades, and a publication list to jobs@simula.no.
The subject of the email must contain 0810 Scientific Computing.
Application deadline: February 15, 2008
Postdoctoral Positions: Infectious Disease Modeling, Taiwan
SMB Digest Vol 8, Issue 1 - January 9, 2008 Positions: 1-2 Postdoctoral positions to work on mathematical modeling and
statistical analysis of infectious diseases epidemiology in the newly formed
infectious disease modeling group at Biostatistics Center, China Medical
University, Taichung, Taiwan.
Background needed: Strong potential in Mathematics, Statistics, Ecology,
Physics, Biostatistics, Epidemiology, or related modeling/computation degree.
Past experience in modeling of infectious disease epidemiology or ecology is
preferred but not required.
Salary: NT$55,000-75,000/month depending on qualification, plus 1.5 month
bonus each year (1 US$=33 NT$); airfare reimbursement possible, full health
insurance coverage.
Term: Positions are 1-3 years, subject to renewal of grant.
Time: Starting August 1, 2008 (with some flexibility).
Location: Biostatistics Center, College of Public Health, China Medical
University, Taichung, Taiwan (Website: http://www.cmu.edu.tw or
http://english.cmu.edu.tw/). Taichung is a city of 1 million in the central
part of Taiwan, two hours south of Taipei. (See
http://www.tccg.gov.tw/eng/index.htm)
To apply: Send CV, statement of research interest, and 3 references to
Professor Ying-Hen Hsieh, email address: hsieh@mail.cmu.edu.tw. (Webpage:
http://amath.nchu.edu.tw/~yhhsieh)
To receive full consideration for August 2008 starting date, please send
application as soon as possible.
Group Leader: Biomodeling & Biosystems Analysis, NISB, Amsterdam
SMB Digest Vol 8, Issue 14 - April 8, 2008 Group leader biomodeling and biosystems analysis
Netherlands Institute for Systems Biology (NISB, www.sysbio.nl)
Amsterdam, The Netherlands
The Netherlands Institute for Systems Biology (NISB, www.sysbio.nl) is a
joint venture of the two Amsterdam universities (the Vrije Universiteit and
the University of Amsterdam) and two national research institutes in
Amsterdam (the CWI (Netherlands research institute for mathematics and
computer science) and AMOLF (FOM Institute for Atomic and Molecular
Physics)).
The Netherlands Genomics Initiative (NGI, www.genomics.nl) has recently
initiated the Netherlands Consortium for Systems Biology (NCSB), a 15 million
Euro national research program to implement systems biology in ongoing
research lines of seven high ranking Dutch research groups in the fields of
biomedical and biotechnological research. As part of this investment a
Biomodeling and Biosystems Analysis Group will be set up in the Netherlands
Institute for Systems Biology (NISB) in Amsterdam.
The task of the Biomodeling and Biosystems Analysis Group is to develop
generic as well as specific tools and approaches for modeling and analysis of
complex biological systems, specifically those that are addressed in the
context of the NCSB program. The group will be housed in Amsterdam in the
premises of one of the four parties that constitute the NISB (two
universities and two national research institutes in Amsterdam). The group
leader has a budget of 1.5 million Euro for a period of five years. A tenure
position can be negotiated for this function.
In addition to the postdocs, PhD students and other personnel in the group,
the group leader will be responsible for the modeling and system analysis
activities of about twelve investigators (postdocs and PhD students) that are
positioned in the different biomedical and biotechnological research groups
that participate in the NCSB program. In this, the Biomodeling and
Biosystems Analysis Group plays a central role in the NCSB program.
Candidates should fulfill the following criteria.
- Strong track record in modeling and analysis of complex biological systems
based on experimental data sets.
- Able to build bridges between mathematicians/physicists/informaticians and
experimental biologists.
- Proven leadership.
- Able to communicate with researchers in the fields of biomedical and
biotechnological research.
Application should be send to the director of the Netherlands Institute for
Systems Biology (NISB): prof. Dr Roel van Driel, c/o University of Amsterdam,
Kruislaan 318, 1098SM Amsterdam, the Netherlands. Information can be obtained
from the same person (office: +31 (0)20 525 5150; home: +31 (0)251 657 356;
mail: van.driel@science.uva.nl). Deadline May 1st, 2008.
Computational Biologist
Dow AgroSciences seeks a Computational Biologist to assist in the
analyses of biological datasets. This position is located in
Indianapolis, IN, USA.
Applicants should have a Ph.D. in computer sciences, bioinformatics,
computational biology, statistics or closely related field, with
emphasis in machine learning. A solid foundation on statistics is
preferred.
The successful candidate will join the R&D Operational Excellence
function and will work closely with scientists in the company's Plant
Genetics & Biotechnology R&D organization. Key job responsibilities will
include development and application of machine learning and statistical
algorithms and software to mine biological datasets. Extensive
development of software to integrate and automate data for mining is
also expected. Topics of interest include bioinformatics, Bayesian
networks, support vector machines, instance-based algorithms, decision
trees, neural networks, and mixed models. Analysis of biological
experiments, interpretation and presentation of results are also
expected; as well as to act as a guide for the ongoing research process.
The candidate will also be expected to identify and implement new
quantitative methods that improve the integrity and efficiency of Dow
AgroSciences product development cycle. Demonstrated ability to write
scientific papers is also desirable. Strong communication skills are
essential along with an ability to collaborate effectively with both
laboratory and field scientists.
Please visit www.dowagro.com/careers to apply online for this position.
The deadline for the submission of applications is May 10, 2008.
Dow AgroSciences, LLC is a wholly-owned subsidiary of The Dow Chemical
Company, one of the top companies for research and development in the
US.
Dow AgroSciences, LLC is a top tier agricultural company providing
innovative crop protection, pest and vegetation management, seed, and
agricultural biotechnology solutions to serve the world's growing
population. We do this through a people-centric performance culture,
through our commitments to sustainable development and environmental
stewardship, and through collaborations with world-class institutions.
Dow AgroSciences is an equal opportunity employer offering excellent
career opportunities, as well as competitive compensation and benefits
package.
Tenured Positions: Systems and Synthetic Biology, Evry
SMB Digest Vol 8, Issue 12 - March 20, 2008
Dear Colleague,
I am seeking your help in identifying suitable high-level candidates
for:
- 1 tenured Associate Professorship in Synthetic Biology and
Biophysics (1);
- 1 tenured Assistant Professorship in Systems Biology and Genome
Architecture (2).
Interested applicants must have been previously "qualified" by the
French ministery (Qualifications au CNU), and should apply by regular
mail to the University before April 01, 2008. Coming up soon on
http://www.univ-evry.fr/PagesHtml/RecrutementEC_2008.htm
Please encourage interested applicants to contact me ASAP.
Yours sincerely,
François Képès
http://www.epigenomique.genopole.fr/~kepes
Epigenomics Project, Genopole®
Tour Évry2, 10th floor, 523 Terrasses de l'Agora
F-91034 ÉVRY cedex, FRANCE
Francois.Kepes@epigenomique.genopole.fr
Phone: 33 1 69 47 44 31
Assistant: 33 1 69 47 44 30
Fax: 33 1 69 47 44 37
These two Professorships will start in Sept 2008 in Evry near Paris.
Research will take place at the newly founded institute of Systems and
Synthetic Biology (iSSB) of Genopole®.
Genopole® is the largest French Biopark, with over 60 biotech companies
and over 20 academic laboratories, and a total of about 2000 scientists. iSSB
offers a creative and interdisciplinary setting in a brand new 2000 m2
building opening at the end of the year (a brief description is attached).
Teaching will be at the Department of Biology, University of Evry (yet
non-biologists are strongly encouraged to apply).
Professor: Biostatistics, Free University of Brussels
SMB Digest Vol 8, Issue 12 - March 20, 2008
Open position for a professor in Biostatistics at the Department of
Mathematics of ULB (Free University of Brussels) starting in October 2008.
Description
The Faculty of Sciences of the Free University of Brussels (ULB) announces
the opening of a full-time position for a "chargé de cours" (first
professorial level) in Biostatistics starting October the 1st, 2008.
This is a tenured full-time permanent position within the Department of
Mathematics. The position involves both teaching and research and some
commitment to administrative tasks. For candidates not fluent in French, a
temporary period of teaching in English may be granted.
The candidate will be expected to create a Master in Biostatistics.
Evaluation will be based on the ability to create a research group, as well
as participating to high quality teaching at the Department of Mathematics.
Candidates are required to have a PhD in mathematics, research papers
published at an international level in the domain of biostatistic, and should
demonstrate their ability for teaching at university level. A significantly
long research stay in a foreign university or research laboratory will be
considered as an advantage. The successful candidate should progressively
increase the teaching activities to reach a level comparable to that of other
professors(typically 5 hours a week for two semesters). This position will
become permanent after a trial period of three years.
How to apply ?
Applications should be sent as soon as possible, and before May, 1st 2008 to
the following address:
Professeur Philippe Vincke, Recteur de l'ULB
ULB CP 130
Av F.D. Roosevelt
B-1050 Bruxelles
with subject :"Vacance Chargé de cours en biostatistique au
Département de Mathématique, Sciences".
A copy of the application should be sent to:
Professeur Simone Gutt
Présidente du
Département de Mathématique
ULB CP 218 Campus Plaine
Boulevard du Triomphe
B-1050 Bruxelles
The application should consist of a description of the candidate's research
goals, a curriculum vitae and a copy of the most significant publications (up
to five).
Additional information :
As stated by the 1rst article of its statute, the University of Brussels is a
non discriminating institution and all its members are expected to adhere to
its fundamental principles. For any additional information please contact
Prof. Simone Gutt ( sgutt@ulb.ac.be ), head of the Department of
Mathematics.
Tenure-Track/Tenured Investigator Positions, NCI, NIH
SMB Digest Vol 8, Issue 10 - March 10, 2008
EPIDEMIOLOGIST,
INFECTIONS AND CANCER
Tenure-Track/Tenured Investigator Position
The new Infections and Immunoepidemiology Branch (IIB,
http://www.dceg.cancer.gov/iib) in the Division of Cancer Epidemiology and
Genetics (DCEG), National Cancer Institute (NCI), National Institutes of
Health (NIH), Department of Health and Human Services (DHHS), is recruiting
for a tenure-track/tenured epidemiologist with experience and interest in the
study of infectious agents and cancer risk.
Research at the IIB focuses on understanding the causes and mechanisms
involved in the development of tumors linked to infectious agents and in
understanding the mechanisms underlying successful immune responses as they
relate to cancer risk and to successful responses to vaccination. Both
infectious and host immunological factors are considered in the context of
human epidemiological studies. Studies undertaken by the group are often
large, international and include rich biological specimen components to
permit in-depth evaluation of biological processes, including immunological
and inflammatory mechanisms, involved in tumor development using
state-of-the-art techniques. The Branch houses the 7,500 woman
community-based vaccine trial in Costa Rica designed to evaluate the efficacy
and impact of a new HPV-16/18 virus-like particle vaccine and has an active
set of studies aimed at evaluating the role of numerous infectious agents
(including EBV , HIV, HPV, HTLV-1, and KHSV) and tumor sites (including
cervical cancer, gastric cancer, Hodgkin and non-Hodgkin lymphomas, lung
cancer, nasopharyngeal carcinoma, and oral/oropharyngeal cancers). Recent
efforts have also begun to explore how the microbiome might affect immunity
and long-term cancer risk.
The successful candidate will receive research support from the intramural
research program of NIH for conducting innovative studies aimed at
elucidating the role of infectious agents in tumor development. Applicants
must have an M.D. and/or Ph.D. in epidemiology or a related field, and
considerable post-doctoral experience in cancer epidemiology, viral
epidemiology, molecular epidemiology, microbial genomics and/or tumor
immunology. A record of peer-reviewed publications in one of these fields is
required. A demonstrated ability to lead complex epidemiologic
investigations is highly desirable. The successful candidate should have
strong analytical/quantitative skills, a good understanding of biological
processes, and a demonstrated ability to collaborate across disciplines.
Strong or al and written communication skills are an important requirement.
Applications will be evaluated on their ability to develop a creative,
independent program of epidemiological research applicable to understanding
infectious determinants of cancer risk; and to collaborate effectively in a
multidisciplinary setting.
IMMUNOEPIDEMIOLOGIST
Tenure-Track/Tenured Investigator Position
The new Infections and Immunoepidemiology Branch (IIB,
http://www.dceg.cancer.gov/iib) in the Division of Cancer Epidemiology and
Genetics (DCEG), National Cancer Institute (NCI), National Institutes of
Health (NIH), Department of Health and Human Services (DHHS), is recruiting
for a tenure-track/tenured epidemiologist with experience and interest in the
study of immunology and cancer.
Research at the IIB focuses on understanding the causes and mechanisms
involved in the development of tumors linked to infectious agents and in
understanding the mechanisms underlying successful immune responses as they
relate to cancer risk and to successful responses to vaccination. Both
infectious and host immunological factors are considered in the context of
human epidemiological studies. Studies undertaken by the group are often
large, international and include rich biological specimen components to
permit in-depth evaluation of biological processes, including immunological
and inflammatory mechanisms, involved in tumor development and vaccination
responses using state-of-the-art techniques. The Branch has an active set of
studies aimed at evaluating the role of numerous infectious agents (including
EBV, HIV, HPV, HTLV-1, and KHSV) and tumor sites (including cervical cancer,
gastric cancer, Hodgkin and non-Hodgkin lymphomas, lung cancer,
nasopharyngeal carcinoma, and oral/oropharyngeal cancers). Recent efforts
have also begun to explore how the microbiome might affect immunity and
long-term cancer risk.
The successful candidate will receive research support from the intramural
research program of NIH for conducting innovative studies aimed at
elucidating inflammatory and immunological mechanisms of HPV-related or other
cancers and/or vaccine responses. Applicants must have an M.D. and/or Ph.D.
in epidemiology or a related field, and considerable post-doctoral experience
in cancer epidemiology, molecular epidemiology, and/or tumor or vaccine
immunology. A record of peer-reviewed publications in one of these fields is
required. A demonstrated ability to lead complex epidemiologic
investigations is highly desirable. The successful candidate should have
strong analytical skills, a good understanding of biological/immunological
processes, and a demonstrated ability to collaborate across disciplines.
Strong oral and written communication skills are an important requirement.
Applications will be evaluated on their ability to develop a creative,
independent program of epidemiological research applicable to understanding
infectious determinants of cancer risk; and to collaborate effectively in a
multidisciplinary setting.
Interested individuals should send a cover letter, curriculum vitae, a brief
summary of research experience, accomplishments and research interests and
goals, copies of three publications or preprints, and three letters of
reference to:
Ms. Judy Schwadron
Division of Cancer Epidemiology and Genetics
National Cancer Institute
6120 Executive Blvd. EPS/8073
Bethesda, MD 20892
Candidates should submit applications by May 30, 2008; however, the search
will continue until a qualified candidate is found. Additional information
about staff and ongoing research in the Division of Cancer Epidemiology and
Genetics and in the Infections and Immunoepidemiology Branch is available at
http://www.dceg.cancer.gov. Prospective applicants should send E-mail
inquiries to Allan Hildesheim, Ph.D., Branch Chief
(hildesha@exchange.nih.gov). This position is subject to a background
investigation. DHHS and NIH are Equal Opportunity Employers.
Instructorship Position: Computational and Applied Mathematics, Rice U
SMB Digest Vol 8, Issue 9 - March 3, 2008
The department of Computational and Applied Mathematics at Rice University is
seeking an NSF VIGRE Instructor. Candidates must be US citizens or permanent
residents with a Ph.D. in a math-heavy field with focus on math biology,
preferably computational neuroscience. Duties include teaching one course per
semester and co-organization of a research seminar.
Please reply to cox@rice.edu
Steve Cox
Professor of Computational and Applied Mathematics
Director: Gulf Coast Consortium for Theoretical and Computational Neuroscience
http://cohesion.rice.edu/centersandinst/gcc/neuro.cfm
Rice University
6100 South Main Street
Hosuton, TX 77005
Research Position: Computational Cardiology, CRS4, Italy
SMB Digest Vol 8, Issue 8 - February 25, 2008
The Bioinformatics Laboratory of CRS4 (Center for Advanced Studies, Research
and Development in Sardinia) invites applications for a position to work in
the area of Virtual Physiological Human research. The successful candidate
will work within the frame of an EU funded research project aiming at
creating an advanced computational technology for in silico assessment of
drug cardiac toxicity, cooperating with leading groups in the field.
The applications we are targeting require the development of simulation tools
at a very large scale on massively parallel computers (the entire heart or
parts of it). The candidate will investigate adaptive numerical algorithms to
handle nonlinear wave propagation in 3D diffusion-reaction systems and
implement it on high-performance platforms.
The suitable candidate ideally has a PhD or Master preferably from
engineering, mathematics or physics background with sufficient work
experience in relevant areas. Essential skills for this position include
numerical techniques for solving PDEs, linear algebra and computer (parallel)
programming.
The position is for 3 years, starting not later than june 2008. Appointments
can be made at either junior or senior level, depending on previous
experience and curriculum.
Interested candidates are encouraged to submit their application as soon as
possible. Please send your CV, a cover letter describing your background and
research interests, and the names and email addresses of at least 2
references to job_bioinfo@crs4.it
All files should be sent in .pdf format under the subject 'Computational
Cardiology'.
Contact Information
CRS4 (Center for Advanced Studies,
Research and Development in Sardinia)
Bioinformatics Laboratory
Simulation and Modeling
Giorgio Fotia / Fabio Maggio
http://www.bioinformatica.crs4.org
Chair in Complexity Science: ICSS, Strathclyde
SMB Digest Vol 8, Issue 8 - February 25, 2008
Applications are invited for a new
Chair in Complexity Science
at the University of Strathclyde, UK,
based within the Departments of Mathematics and Physics
and hosted by the Institute of Complex Systems at Strathclyde (ICSS).
The successful applicant will have a multidisciplinary outlook and a strong
research record in the broadly defined area of complexity science.
Collaborations are already in place in the ICSS among participating groups
from a wide base of disciplines (Mathematics, Physics, Biology, Engineering,
Chemistry, Computer Science), and the new Professorship will allow us to
further develop these collaborations and establish new ones.
Further details are available at
https://soolin.mis.strath.ac.uk/vacancies/control/vacancyMenu
Neuroimaging Assistant/Associate Professor: Yale Child Study Center
SMB Digest Vol 8, Issue 8 - February 25, 2008
Yale University New Faculty Position:
Neuroimaging Assistant/Associate Professor
The Yale Child Study Center is recruiting for a new faculty position in
neuroimaging with a particular emphasis on autism and related conditions. A
range of opportunities for collaboration are available including work with
leading researchers in the departments of Psychiatry, Psychology, Pediatrics,
Neuroimaging, and Neurobiology.
There are also opportunities to participate in graduate teaching. The level
of the position will be commensurate with the successful applicant's
experience. The position includes laboratory space and a generous start-up
package.
For more information
Applicants should submit a letter of interest, curriculum vitae, three
letters of reference, and sample publications by March 15, 2008 to:
Dr. Fred R Volkmar, Chair of faculty search committee,
Yale Child Study Center,
P.O. Box 207900, New Haven, CT 06520-7900.
Email fred.volkmar@yale.edu electronic submission is encouraged.
Yale University is an Affirmative Action-Equal Opportunity Employer and
welcomes applications from women and minority candidates.
Expiration date of posting: 3/26/2008
Lectureship: Biomathematics, Imperial College London
SMB Digest Vol 8, Issue 7 - February 18, 2008
Applications are invited for a Lectureship in Biomathematics within the
Department of Mathematics at Imperial College London, starting 1 October 2008
or as soon as possible thereafter. Collaboration be-tween biomedicine and the
mathematical sciences is a very high priority throughout the whole of
Imperial College London. Within the Department of Mathematics, this has been
reflected by the recent appointments of a chair and a lectureship in this
field and the establishment of the Biomathematical Sciences research group.
Members of this group have a very broad range of research interests,
including cellular decision making, gene and protein networks, pattern
formation, DNA topology and models of evolution.
Many have close links with experimental biologists in the Faculties of Life
Sciences and Medicine. Further details can be found at
http://www.ma.imperial.ac.uk/ammp/bms/index.php
The D